Pairwise Alignments

Query, 210 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 210 a.a., threonine transporter RhtB from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 2e-29
 Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 8/210 (3%)

Query: 5   TLLAFAVVAFIGIATPGPTVLLALANGSKFGVRRAMIGMAGAVLSDVVLIGAVALGLGAL 64
           T LAF + ++I   +PG   + ++++G ++G  R      G  L   + I  VA GLGA+
Sbjct: 5   TWLAFFLASWIISLSPGAGAIASMSSGLQYGFLRGYWNAIGLQLGLAMQIAVVACGLGAI 64

Query: 65  LAASEFWFGVVKWVGVCYLVFLGIMLLRSRGMLGALGSTEENGA---ASARSIFLKSFLV 121
           LA S   F  +KW GV YLV+L I   R+  M      T+E          ++  + FLV
Sbjct: 65  LATSSTAFYAIKWFGVAYLVYLAIKQWRALPM----DMTDEAAVRPIGKPMAMMFRGFLV 120

Query: 122 AVTNPKGYLFFSAFLPQFIDPAAPQIQQYAVLALVFAGIDFIVMFGYALLGAQAVRVLR- 180
             +NPK  +F  A LPQF++P AP + QY +L      +D +VM GY  L ++ +R+LR 
Sbjct: 121 NASNPKALVFMLAVLPQFVNPQAPLLIQYLILGATMICVDMVVMAGYTGLASKVLRLLRT 180

Query: 181 KSGALWLDRICGGALLTLAASLALYRRASA 210
                 L+R   G  +  A  LA   RA+A
Sbjct: 181 PKQQKRLNRTFAGLFVGAAGFLASLHRATA 210