Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  244 bits (623), Expect = 2e-69
 Identities = 134/331 (40%), Positives = 199/331 (60%), Gaps = 3/331 (0%)

Query: 11  LSGQIGSIAVTLLGLLLLTFFIGRLMPADPVRAIVGEDATR-ETYEQVYHALGFDRPLWQ 69
           ++ ++G +  T  G+ LLTF + RL+P DPV  ++GE     E + Q    LG ++PL  
Sbjct: 5   IARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLPV 64

Query: 70  QFIYYLGDVFTGDFGTSIRTGRPVIEDIIRVMPATMELATFAILIGAGLGIPMGVYAAVN 129
           Q++ Y+G +  GD G S+RT   V  + + + PAT+ELA  A+L    +G+  GV AA+ 
Sbjct: 65  QYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVIAALK 124

Query: 130 KDRWQDHLVRVLSLFGHSMPIFWTGMIALIVFYAHLGLVGGGGRMDQFYIGLVEERTGFL 189
           +    DH V  +SL G+SMPIFW G+I ++ F   LG     GR+D  Y   +E +TGF+
Sbjct: 125 RGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYD--IEPKTGFM 182

Query: 190 LIDSLLAGDMEVFWSAINHLILPAALLGYSSSAYITRMTRSFMLDQLGQEYVTTARVKGL 249
           LID+LL+ +   F  A+ HLILPA +LG    A I RMTRS ML+ L ++Y+ TAR KGL
Sbjct: 183 LIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGL 242

Query: 250 SQRQTVWLHAFGNIRVQLVTIIALAYGSLLEGAVLIETVFAWPGFGQYLTSNLIIGDMNA 309
           S  + V++H   N  + ++T+  L  G+LL GAVL ET+F+WPG G++L   +   D   
Sbjct: 243 SPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPV 302

Query: 310 VMTCVLIVGVIFIGLNLLSDILYRFFDPRTR 340
           V   +L++  + I +N + DILY   +PR R
Sbjct: 303 VQNGILLIACLVILVNFVVDILYGLANPRIR 333