Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  236 bits (601), Expect = 6e-67
 Identities = 125/270 (46%), Positives = 175/270 (64%), Gaps = 8/270 (2%)

Query: 31  SAFGLAVLLLLVIAAIFAPWLATHDPYAQDLANTLQAP-----GNGH-VFGTDELGRDIY 84
           +  GLA + L+V  A+FAPW+A HDP  Q     L  P     G    + GTDELGRD+ 
Sbjct: 38  AVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLL 97

Query: 85  SRLLWGARITLTIISLVSIIVGPV-GLLVGTASGYLGGKFDTVMMRITDIFLSFPSLILS 143
           SRL+ GAR++L +I L S+++  + G+L+G  +G+        +MR+ D+ L+ PSL+L+
Sbjct: 98  SRLIQGARLSL-LIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLA 156

Query: 144 LAFVAALGPSLNNAIIAIALTSWPPIARLARAEAMTFRKADYIAAARLQGASPLRIIVKS 203
           +A VA LGP L N +IAIA+ S P   RL RA  M     DY+ AARL GA   R++  +
Sbjct: 157 VAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVT 216

Query: 204 IMPMCLPSVLIRLTLNMATVILTAAGLGFLGLGAQPPLPEWGAMIATGRRYMLDSWWLVT 263
           ++P C+  ++++ TL+ ++ IL AA LGFLGLG QPP PEWG M+A+ R Y+  +WW+V+
Sbjct: 217 VLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVS 276

Query: 264 FPGVAILSVSLAFNLLGDGLRDALDPKQMN 293
            PG+ IL   LA NL+GDGLRDALDPK  N
Sbjct: 277 LPGLTILLSVLAINLMGDGLRDALDPKLKN 306