Pairwise Alignments

Query, 252 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  189 bits (480), Expect = 6e-53
 Identities = 104/258 (40%), Positives = 160/258 (62%), Gaps = 13/258 (5%)

Query: 1   MAVSVETRDLSITFG------SGHTALKVLPSVSFRVEPGECFGLVGESGSGKSTVLRCV 54
           MAV +  R+L+  +        GH  ++ L  VSF +E G+   +VGESG GKST+ R +
Sbjct: 1   MAVVLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 55  SMLNDFWTGDILIDGRSVRDIPLIERCRM---LQMVFQDPYGSLHPRQSVRTVLSESLAI 111
           +++ +  +G + I G  V+     ER ++   +QMVFQ PY SL+PRQ +   L+E L I
Sbjct: 61  TLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLI 120

Query: 112 H---KLGDREERMRKVITDVGLPVSFLDRFPHQLSGGQRQRVAIARALILEPSLLLLDEP 168
           +      +R ++++K++  VGL      R+PH  SGGQRQR+A+ARA++L+P +L+ DEP
Sbjct: 121 NTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP 180

Query: 169 TSALDVSVQAEILNLLQRLREERGFTYIMVTHDLAVVDHMCDRFAVMLRGEITEILPREA 228
           TSALDVS+QA++LNL   L++E    Y+ ++H+LAVV H+ D+  VM  G   E+ P+E 
Sbjct: 181 TSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKED 240

Query: 229 IAGNGATHPYARELIGAS 246
           I      HPY + L+ A+
Sbjct: 241 IYAK-PLHPYTQALLSAT 257