Pairwise Alignments

Query, 532 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 545 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  316 bits (809), Expect = 2e-90
 Identities = 187/530 (35%), Positives = 294/530 (55%), Gaps = 22/530 (4%)

Query: 5   LATAALGALLIGAMPLSSFAETPKDQLIVATTMSNILTLDPAAITGRETVQVLNNVYDTL 64
           L+T+A  +L++ + P  +FA TP D L+    + +I+TLDP         +V  N Y  L
Sbjct: 12  LSTSAALSLMMLSAP-HAFAATPADTLVEGFAIDDIITLDPGEAFELSAAEVTGNTYSKL 70

Query: 65  VVLSPEDRS-VQPRLAERWEIAEDRKSIRFYLRADARFASGNVVTAKDVAWSLKRLLARN 123
           V +   D S V   LAE W  +ED  +  F L++  +FASGN +TA DVA+S +R +  +
Sbjct: 71  VSIDLNDTSKVIGDLAESWTTSEDGLTYTFKLKSGLKFASGNPITADDVAFSFERAVKLD 130

Query: 124 LAQSSFLKTRGFKLEEADKLFVAENDQTFVLNIPKPDDPNLLLMILAQNGPGSIIDSKTA 183
            + +  L   G K +  ++   A +  TFVL + KP  P+ +L +L      +++D K  
Sbjct: 131 KSPAFLLTQFGLKGDNVNEKAKAADANTFVLTVDKPYAPSFVLNVLTAT-VAAVVDKKLI 189

Query: 184 LENEK----------DGDLGGAWLTLNSAGSGPFKLTQWKSNEYIILTRNDDYWGEKAKM 233
            E  K          D D G  +L    AGSGP+K+  WK+NE +IL  N +Y+GEK K+
Sbjct: 190 TEKAKSVTPSADYKYDTDFGNEFLKTGYAGSGPYKILGWKANEAVILEANPNYYGEKPKL 249

Query: 234 KRILMRHLPESQSQRLMLEKGDIDVAYSLQAPDLKSLEADKAVTIESTPGSGFYYLSVSM 293
           KR++ RH+ ES  QRL LE GDIDVA +L+  D++++   + + + S P    YY S++ 
Sbjct: 250 KRVVYRHMKESSGQRLALENGDIDVARNLEPGDMEAVSKKEGLAVTSAPKGTVYYFSLNQ 309

Query: 294 KNEKFANKKVREALRYLIDYDGLDKAVMPYYGKLHQRSLSTGVMGALPDQGYKLDIEKAK 353
           KNE     +V EAL+YL+DYD +   ++   G++HQ  L  G +GAL +  YKLD+ KAK
Sbjct: 310 KNENLKKPEVVEALKYLVDYDAIGATIIKGIGEVHQTFLPKGQLGALDENPYKLDVAKAK 369

Query: 354 ALLTEAGYPNGFKTTLRVLSEDPFMKAATAIQNTLAQAGIQAELISGSGDQIYGAMRERN 413
            LL +AG  +GF  T+ V +  P    A ++Q TLAQAGI+ E+I G G Q     R R 
Sbjct: 370 ELLAKAGLKDGFTVTMDVRNTQPVTGIAESVQQTLAQAGIKLEIIPGDGKQTLTKYRART 429

Query: 414 FELLLGRGGGGQQPHPDNNLRSIAYNPNNADDAKLTNYQSWRTSFFDEKLNKMIEEALVE 473
            ++ +G+  G     P++N  +   N +N+D+ K     +WR ++    L K  + AL+E
Sbjct: 430 HDIYIGQ-WGSDYFDPNSNAETFTINYDNSDEGK-NKTLAWRNAWDVPDLTKETQSALLE 487

Query: 474 RDVAKQTKLYEDLQGYMDEIVMSIQPF---SEVVDTAAFRSDVKGMIVSP 520
           +D AK+  +Y++LQ    + V++  PF    +  + A + + +KG+ + P
Sbjct: 488 KDTAKRAAIYQNLQ----KEVLAKGPFVIIFQQTEVAGYSAKLKGLKLGP 533