Pairwise Alignments

Query, 532 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 537 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  125 bits (314), Expect = 4e-33
 Identities = 112/411 (27%), Positives = 193/411 (46%), Gaps = 41/411 (9%)

Query: 5   LATAALGALLIGAMPLSSFAETPKDQLIVAT-TMSNILTLDPAAITGRETVQVLNNVYDT 63
           LA  ALG  +  A+PL   A   +D++ VA  TM    +LDPA +T       + N+YD 
Sbjct: 16  LAMLALGTAM--ALPLVPSAAFAEDKVSVAVNTMQIFSSLDPAKVTDYTGYMAIVNMYDG 73

Query: 64  LVVLSPEDRSVQPRLAERWEIAEDRKSIRFYLRADARFASGNVVTAKDVAWSLKRLLARN 123
           L  ++ +   V P LA+ W++++D  +  F+LR DA+F  G  V A D+AWS++RLL  N
Sbjct: 74  LTTVNAKGEIV-PHLAKSWDVSQDGLTYTFHLRDDAKFQDGTAVKAADLAWSIQRLLGIN 132

Query: 124 LAQSSFLKTRGFKLEEADKLFVAENDQTFVLNIPKPDDPNLLLMILAQNGPGSIIDSKTA 183
              S+ +     K E       A ++ T V+ I +   P +    L      ++I++   
Sbjct: 133 KGPSNLI-VGVLKPENV----TAPDEATLVMKIERQFSPFMAATPLMMAMNKTLIEANAK 187

Query: 184 LENEKDGDLGGAWLTLNSAGSGPFKLTQWKSNEYIILTRNDDY---WGEKAKMKRILMRH 240
            E++     G A++  +SAGSGP+KL  +  +  +++ RN DY   W +   +  +    
Sbjct: 188 PEDK----WGEAYVGEHSAGSGPYKLVSYNRSADMVIARNADYFLGWSKGKPIDEVRFVQ 243

Query: 241 LPESQSQRLMLEKGDIDV-AYSLQAPDLKSLEADKAVTIESTPGSGFYYLSVSMKNEKFA 299
             +  + + + EKG++ + ++ L     +S+   K   +  T  +G + + ++ K     
Sbjct: 244 TSDDATVKALAEKGELGLSSHGLGNDTYESIGRMKGYKLIQTRTAGGFVIKLNTKVYPTD 303

Query: 300 NKKVREALRYLIDYDGLDKAVMPYY---GKL-------HQRSLSTGVMGALPDQGYKLDI 349
           +  VR A+ Y  DY  + + + P +   G L       H   +  GV           D+
Sbjct: 304 DVHVRRAIAYATDYKTIQEVIYPGFDMRGPLSDAFKDAHNGDIQPGV----------YDL 353

Query: 350 EKAKALLTEAGYPNGFKTTL---RVLSEDPFMKAATAIQNTLAQAGIQAEL 397
           EKAK  L ++ Y  G K TL    V S     + A  +Q++L Q GI  ++
Sbjct: 354 EKAKEELAKSKYA-GQKITLVNSYVASLAFEAEVALLLQSSLEQVGITLDI 403