Pairwise Alignments

Query, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 547 a.a., Oligopeptide-binding protein AppA from Xanthobacter sp. DMC5

 Score =  514 bits (1323), Expect = e-150
 Identities = 258/521 (49%), Positives = 347/521 (66%), Gaps = 3/521 (0%)

Query: 12  ALAAGAFVALP--GGSFAAAEEPVSGGTLKIVYFPEPTQLVAINTSAGGPQFIGSKIYDG 69
           A   GA  A P       +  +PV GG L+ +   EP+ LV+I  +AG  Q +  K+ +G
Sbjct: 27  ACVLGAAAAAPVWAADAQSTPQPVRGGVLRFLVEHEPSTLVSIAHTAGPTQRVSPKVTEG 86

Query: 70  LLTYDYELSPKPSLAKEWSVSADGLEYVFHLQPNAKFHDGKPVTSADVEFSILRLKEAHP 129
           LL YD + +PKP+LA EWSVS DGL Y F L+   K+HDG+  T+ DV +SI  LKE HP
Sbjct: 87  LLAYDLDFNPKPALATEWSVSPDGLTYTFKLREGVKWHDGRDFTADDVAYSIQLLKEGHP 146

Query: 130 RGRATFANVESIDTSNPLVAKVKLSKPAPGLITALASSESPVVPKHIFETFKPTDNPKPA 189
           RGRATFA+V +++T +P  A ++LSKPAP L+TAL ++ESP+V KHI+    P  N   A
Sbjct: 147 RGRATFASVTAVETPDPHTAIIRLSKPAPYLLTALDANESPIVAKHIYAGTDPLTNKNGA 206

Query: 190 QIIGSGPFVLKEWVPGSHILLEKNANYWDAPRPYLDRVIIRLINDAGARAAALETGEGDI 249
             IG+GPF+ KEWV GSHI+LE+N +YWDA +PYLDRV++R I D  ARAAA ETGE D+
Sbjct: 207 APIGTGPFLFKEWVRGSHIILERNPDYWDADKPYLDRVVVRFIADQSARAAAFETGELDL 266

Query: 250 -GPNPVALADLERLKSIPTLKVDDRIYAYAGQQNQLVINLENDYLKELKVRQAIAHAIDV 308
            G  PV  +DL R++++P L  + R Y Y G   QL  N +   LK+ +VR AIA A+D+
Sbjct: 267 AGGPPVPRSDLARVQALPNLGSETRGYEYNGNMTQLYFNFDTPQLKDKRVRLAIAQALDL 326

Query: 309 PALIDTVLYGYAVPSPTPISPGLAKFHNPDIGFAKFDVALAEKLLDEAGFPRKDGGKRFK 368
             L+D V +GY   +P+P+ P L KF +P I    FD+  A +LLDEAG+PRK  G RF 
Sbjct: 327 NKLLDVVYFGYGTIAPSPVGPDLKKFVDPSIKPYPFDLKAANRLLDEAGYPRKADGTRFA 386

Query: 369 LRVTTNPFNPQTYSDFIAQALSKIGIEADIQKFDFGTYVKVVYTDRAWDLSVESLSNTFD 428
           LR+  NPFN +   DF+ QAL+K+GI  D Q FDF TY++  YT R +DL++ESLSNTFD
Sbjct: 387 LRLYANPFNGRESGDFVKQALAKVGIPVDFQFFDFSTYIQKAYTGREFDLTLESLSNTFD 446

Query: 429 PTAGVQRVYWSKNFKIGLPFSNASHYANPEVDRLLEAAAVEPDIEKRAAFFKEFQAVVAK 488
           PT G+QR++WSKNFKIGLPFSNASHY NP+VD LLEA AVE D EKR   +  FQ  +  
Sbjct: 447 PTPGIQRIFWSKNFKIGLPFSNASHYDNPQVDALLEAGAVESDPEKRRQIWFAFQKAIHD 506

Query: 489 DLPVINLVSPIQPVVGSVRIKDYATGAEGLSGNLAKAWVTK 529
           D+  ++L++P    + + ++K++  G  G + + A  W+ K
Sbjct: 507 DVAAVHLIAPQGVTIFNKKVKNHTLGVTGPNASFADVWIEK 547