Pairwise Alignments

Query, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  137 bits (345), Expect = 1e-36
 Identities = 126/468 (26%), Positives = 207/468 (44%), Gaps = 43/468 (9%)

Query: 80  KPSLAKEWSVSADGLEYVFHLQPNAKFHDG------KPVTSADVEFSILRL-------KE 126
           +P LA  W +S DGL Y FHL+   KFH        +   + DV F+  RL       ++
Sbjct: 72  EPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFRQ 131

Query: 127 AHPRGRATFAN------VESIDTSNPLVAKVKLSKPAPGLITALASS----ESPVVPKHI 176
           A+P     F +      ++S+D  +    +  L+      +  LA S    +S      +
Sbjct: 132 AYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQL 191

Query: 177 FETFKPTD-NPKPAQIIGSGPFVLKEWVPGSHILLEKNANYWDAPRPYLDRVIIRLINDA 235
            +  K  + N KP   +G+GPFV K +   S I    N  YW      LD ++  +  DA
Sbjct: 192 LKQGKAEEINQKP---VGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAITPDA 248

Query: 236 GARAAALETGEGDIGPNPVALADLERLKSIPTLKVDDRIYAYAGQQNQLVINLENDYLKE 295
            +R   L+ GE  +   P   AD+E +K  P L V  +     G    L  N+ +  L +
Sbjct: 249 ASRLQKLKAGECQVSGYP-RPADIEVMKQDPNLHVLQQAGFNLG---FLAYNVTHPPLDQ 304

Query: 296 LKVRQAIAHAIDVPALIDTVLYGYAVPSPTPISPGLAKFHNPDIGFAKFDVALAEKLLDE 355
           LKVRQA+  AID PA+I  V       +   + P    + +P I  A +D   A+ LL E
Sbjct: 305 LKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSY-DPTIKDAPYDPTKAKALLKE 363

Query: 356 AGFPRKDGGKRFKLRV--TTNPFNPQTYSDFIAQALSKIGIEADIQKFDFGTYVKVVYTD 413
           AG         + + V   +NP N +  +  I Q   K+GI+A+I  +++G Y+K     
Sbjct: 364 AGVAPGTTVNLWAMTVQRASNP-NARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNG 422

Query: 414 RAWDLSVESLSNTFDPTAGVQRVYWSKNFKIGLPFSNASHYANPEVDRLLEAAAVEPDIE 473
               +      +  DP   +  +Y     K     SN + + NP  D+L++ A V  D E
Sbjct: 423 EHDAMIYGWTGDNGDPDNWLGVLYSCAAVK----GSNYAKWCNPAYDKLVQQAKVSNDRE 478

Query: 474 KRAAFFKEFQAVVAKDLPVINLVSP--IQPVVGSVRIKDYATGAEGLS 519
           +R  ++++ Q ++ + +P+  + +    QP+     +KD+     GL+
Sbjct: 479 QRIKWYQQAQKILKEQVPITPIANSTVFQPL--RKEVKDFKISPFGLT 524