Pairwise Alignments

Query, 311 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 337 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  278 bits (711), Expect = 1e-79
 Identities = 141/295 (47%), Positives = 190/295 (64%), Gaps = 2/295 (0%)

Query: 16  GRGTVRAVDDVSLDIEAGETVALVGESGCGKSSLGKSLMRLVEPSSGRITFKGADVTAMT 75
           G   V++VDDVSL I  GE + LVGESGCGKS++   + RL   + G ++    D+  M 
Sbjct: 37  GHRVVKSVDDVSLTIGEGEVLGLVGESGCGKSTVAGLITRLTHATRGEVSIGDHDILHMQ 96

Query: 76  SSQLRGIRRRIQMIFQDPFASLNPRQTVRTILTAPLKVHGIGDRARQREIVEAIVAQVGL 135
              LR +RR +Q++FQDP+++L+PR  +   + APL  HGIG RA +   V  ++ +VGL
Sbjct: 97  GEALRRVRRVVQLVFQDPYSALDPRMRIGQSMEAPLAQHGIGTRAERTARVFRMLEEVGL 156

Query: 136 PPDALDRYPHEFSGGQRQRIGIARALVLEPELVVCDEPVSALDLSIQAQILNLLVEMKKR 195
                DRYP++ SGGQ QR+ I RAL+L P  +VCDEP SALD S++ QILNLL++MK+R
Sbjct: 157 DGSFYDRYPNQCSGGQLQRVVIGRALLLNPSFLVCDEPTSALDASMRTQILNLLMDMKRR 216

Query: 196 LSLSYLFVSHDLSVVRYFSDRVLVMYLGKIVESAPTAELWASPKHPYTRALLAA--VPDP 253
             L+ L +SHDL VVRY  DR+ VMYLG+IVE A   EL+ +PKHPYT+AL+A+  + + 
Sbjct: 217 HGLTVLMISHDLRVVRYLCDRIAVMYLGRIVEIADREELFRAPKHPYTKALIASSMLDET 276

Query: 254 ARRKQAAPISGDLPSPHDPPAGCRFHTRCPLATDLCREKAPDYALFGKNHAVACH 308
                   + GDLPSP +PP GC+FHTRC  AT +C E  P        H   CH
Sbjct: 277 GLYAPEMLLDGDLPSPLNPPGGCKFHTRCKYATAICGEVEPVLEGVSGEHFARCH 331