Pairwise Alignments

Query, 331 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 291 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  201 bits (510), Expect = 2e-56
 Identities = 107/279 (38%), Positives = 167/279 (59%), Gaps = 8/279 (2%)

Query: 51  RGLRRELKIFLTNPNAIVGLLFLATVLIAALIAPLIYPGDPLE---MVARPFLWPGQNAA 107
           R   R LK FL N +A++G + +   ++ AL+AP I P DP++   +  R       +A 
Sbjct: 15  RAQNRVLKKFLANKSAVIGAVMVGFFVLVALLAPWIAPFDPVKANFLAVRK----APSAM 70

Query: 108 YPLGTDSMGRDVLAGIVHGARISLTVGVVATLIGLTIGISIGAFAGYFGGVIDDILVKLI 167
           Y  GTD +GRD+L+ I+ GAR SL  G ++ +I + IG+ +G  AGYF  + D ++ + I
Sbjct: 71  YWFGTDELGRDILSRIIWGARTSLMAGCMSVVIAVVIGVPLGLVAGYFQKMWDGVISRFI 130

Query: 168 EIFQTLPNFVLLVVLVAIAQPSVTTVTSAIGIITWPLVARLTRAEFRAIREKDYVLAARS 227
           E     P  ++ + L A   PS+T    AIG+   P+ ARLTR +  AIR ++Y+  AR+
Sbjct: 131 EALLACPFLIMAIALGAFLGPSLTNAMIAIGLSAMPIFARLTRGQVIAIRNEEYIDGARA 190

Query: 228 LGYGHARIVFQEILPNALPPIIVTSSVMVAGAILMEAALSFMGLG-DPNRVSWGSMIGSG 286
           +G     I+ + +LPN + PI+V +++ +A AI+ EA+LSF+GLG  P   SWGSM+ + 
Sbjct: 191 IGLPDRWIIIKYVLPNVMSPILVQATLAIASAIIAEASLSFLGLGQQPPNPSWGSMLNTA 250

Query: 287 RDVIRTAWYLTALPGLAIVFTVISLNLISDGLNDALNPR 325
           +  +  A +++  PG+AI   V   NL+ DGL DAL+PR
Sbjct: 251 KGFLEQAPWMSVFPGVAIFLAVQGFNLLGDGLRDALDPR 289