Pairwise Alignments

Query, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  135 bits (340), Expect = 4e-36
 Identities = 123/467 (26%), Positives = 202/467 (43%), Gaps = 40/467 (8%)

Query: 82  KPLLAKSWDVSADGLRYTFNLRPGVKWHDG------KPFTSADVAFSISTIKEVHPRGRN 135
           +P LA SWD+S DGL YTF+LR GVK+H        + F + DV F+ + + +     R 
Sbjct: 72  EPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFRQ 131

Query: 136 TF-----------LNLT--AVETPNELTAVLVLSKP----APYLITALAAAETPIVPKHL 178
            +           LN T  +V+  ++ T    L+         L  + A+ ++      L
Sbjct: 132 AYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQL 191

Query: 179 YEGTKVTENPVNLAPIGTGPFKFKEWVRGSHIVFERNADYWDAPRPYLDRLIVRFIPDAS 238
            +  K  E  +N  P+GTGPF FK + + S I +  N  YW      LD L+    PDA+
Sbjct: 192 LKQGKAEE--INQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAITPDAA 249

Query: 239 ARAIAIETGEIDLAPSTPVAYSDLDRLKELPSLG-FDTNGYQYTNSISRVEFNLEKDVFK 297
           +R   ++ GE  ++     A  D++ +K+ P+L      G+    ++  + +N+      
Sbjct: 250 SRLQKLKAGECQVSGYPRPA--DIEVMKQDPNLHVLQQAGF----NLGFLAYNVTHPPLD 303

Query: 298 DVRVRRAFAHVIDRNVIFNTVNFGYGATIAGPINPKLTKW-FVNDLKTYPIDLKAAEALL 356
            ++VR+A    ID+  I   V    G      + P   +W +   +K  P D   A+ALL
Sbjct: 304 QLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPP--AQWSYDPTIKDAPYDPTKAKALL 361

Query: 357 DEAGYKRGADGIRFKLNLDYVPSTEAYPRGADYIRQALAKVGVDVTVRTQDFATYTKRIY 416
            EAG   G     + + +    +  A    A  I+Q   KVG+   + + ++  Y KR  
Sbjct: 362 KEAGVAPGTTVNLWAMTVQRASNPNA-RMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAK 420

Query: 417 TDRDFDFAYEGMSNLFDPTVGVQRLYWSKNFKKGVPFSNGAAYSNPKVDALLEAAAIEID 476
                   Y    +  DP   +  LY        V  SN A + NP  D L++ A +  D
Sbjct: 421 NGEHDAMIYGWTGDNGDPDNWLGVLYSC----AAVKGSNYAKWCNPAYDKLVQQAKVSND 476

Query: 477 PDKRVAQWKEIQQILVEDVPAIDIVAAPEITIFNKRIADHTIGAEGV 523
            ++R+  +++ Q+IL E VP   I  +       K + D  I   G+
Sbjct: 477 REQRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGL 523