Pairwise Alignments

Query, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  603 bits (1556), Expect = e-177
 Identities = 297/517 (57%), Positives = 374/517 (72%)

Query: 12  FLLASVALGVVSLPGLKLNAAEPASGGTATLLISSEPPVLTTIAHTAYNSVYISPKVTEG 71
           F + S  L  +   GL  +AA P+  GT TLL +SEP  L TI + A   + +S KVTEG
Sbjct: 8   FPIRSALLAALLAAGLAAHAAPPSHSGTLTLLSTSEPTALVTIGNVATPILSVSAKVTEG 67

Query: 72  LLTYDFDLNPKPLLAKSWDVSADGLRYTFNLRPGVKWHDGKPFTSADVAFSISTIKEVHP 131
           LL YD+D+NP+P LA  W +S DGL YTF LR GVKWHDGK FTSADVA+SI  +K++HP
Sbjct: 68  LLKYDYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELLKKIHP 127

Query: 132 RGRNTFLNLTAVETPNELTAVLVLSKPAPYLITALAAAETPIVPKHLYEGTKVTENPVNL 191
           RGRNTF NLTA++TP++ TA+L LSKPAPYLI AL A ETPIVPKH+YEGT    NP N 
Sbjct: 128 RGRNTFANLTAIDTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTDPANNPNNN 187

Query: 192 APIGTGPFKFKEWVRGSHIVFERNADYWDAPRPYLDRLIVRFIPDASARAIAIETGEIDL 251
           APIGTGPFKFKEWVRGSHIV+ERN DYWD P+P++D+LIVRF+ D +A A+A ETG +DL
Sbjct: 188 APIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAAVAFETGTVDL 247

Query: 252 APSTPVAYSDLDRLKELPSLGFDTNGYQYTNSISRVEFNLEKDVFKDVRVRRAFAHVIDR 311
              TPV  +DL+RLK++P+L F+T G  Y+++++R+EFNL+ + FK+ +VR+A AH IDR
Sbjct: 248 GYRTPVPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKVRQAVAHAIDR 307

Query: 312 NVIFNTVNFGYGATIAGPINPKLTKWFVNDLKTYPIDLKAAEALLDEAGYKRGADGIRFK 371
           NVI   VN+GYG     PI P L  +       Y  D+K A ALLDEAG+ + A G+RF 
Sbjct: 308 NVIVKVVNYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAGFPKKAGGVRFS 367

Query: 372 LNLDYVPSTEAYPRGADYIRQALAKVGVDVTVRTQDFATYTKRIYTDRDFDFAYEGMSNL 431
           + LD+ P     PR ADY+R ALA++G+ VTVR QD + + KRIYTDRDF F + G SNL
Sbjct: 368 VPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDFAFTHNGASNL 427

Query: 432 FDPTVGVQRLYWSKNFKKGVPFSNGAAYSNPKVDALLEAAAIEIDPDKRVAQWKEIQQIL 491
           FDPTVGVQRLYWSKNF KGVPFSNG  Y NP VD LLE AA+E DP KR+  +K+ Q  +
Sbjct: 428 FDPTVGVQRLYWSKNFIKGVPFSNGTHYQNPVVDKLLEDAAVENDPGKRLKLFKDFQDTV 487

Query: 492 VEDVPAIDIVAAPEITIFNKRIADHTIGAEGVAGSLA 528
             DVP +++     ITI N+R+ DH++ A+GV  +LA
Sbjct: 488 ARDVPDLNLYQPVFITIANQRVHDHSLTADGVESNLA 524