Pairwise Alignments

Query, 392 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 6e-24
 Identities = 97/377 (25%), Positives = 161/377 (42%), Gaps = 14/377 (3%)

Query: 13  EQQSSPVAIAAALAEDFSQTAADHDKSGEFAAGNFEALFKSGLLGLVTAVKDGGWGEGME 72
           EQQ    A+ A   E     A   DK   F     + + + GL G++   + GG   G  
Sbjct: 6   EQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGYV 65

Query: 73  TAHAVITAIAKGDPSTALILAMHYSVHAA--IRRGKWPAALSAKVLVANNREPALLNN-A 129
                +  IA GD + + I+++H SV     +R G           +A     A+L   A
Sbjct: 66  AYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATG---AMLGAFA 122

Query: 130 QAEPGVGSPAHGGLPETTARIEGDVWVVNGRKSFVTGLPGLKWAIVLAVTTEETPR--LI 187
             EP  GS A     +T AR+EGD +V+NG K F+T        IV AVT  E  +  + 
Sbjct: 123 LTEPQAGSDASS--LKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGIS 180

Query: 188 QLLVPLDAAGIAQEKAWEATGMYATASHDLVLEDVRVPLADIVAEQPADEPLRRDEADGY 247
             +VP D+ G    +  +  G +A+ +  +V ++V+VP+A+ +  +     +     +G 
Sbjct: 181 AFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGG 240

Query: 248 NFFALLASVYHGVALSARDDLLRHLTGHAPVSLGAPLSSIPRIQEGLGQIEVLLAANRRL 307
                +AS   G+A +A +  +     +   S G PL     +   L  +   ++  R++
Sbjct: 241 RIG--IASQAVGMARAAFE--VARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQM 296

Query: 308 LLSVARDIDAGERVGTDALAVRHVVIDNAVTVTDLALELGGNRGLRRDYNLERHHRDAIT 367
           +L  A   DAG     +A   +    + A  V   AL+  G  G   D+ LER +RD   
Sbjct: 297 VLHAAALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRV 356

Query: 368 ARAHAPQSHMIRTILGR 384
            + +   S + R ++ R
Sbjct: 357 CQIYEGTSDIQRMVIAR 373