Pairwise Alignments

Query, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  242 bits (617), Expect = 2e-68
 Identities = 123/249 (49%), Positives = 172/249 (69%), Gaps = 10/249 (4%)

Query: 355 VNIHGVSKSFGSLKVLDDISLSIPAGSVTTILGQSGSGKSTLLRSINHLERVDDGFIAID 414
           + I G++K +G+  VL DI L +  G    + G SGSGKSTL+R IN LE    G I +D
Sbjct: 21  IRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKSTLIRCINRLEVAQQGSIQVD 80

Query: 415 GELVGYRQKGDTLYELKEREILKRRAEVGMVFQSFNLFPHLTALENIIEAPVAVRGISKE 474
           G  +              RE  + R+++GMVFQ FNLFPH++ L+N + AP +VRG+S++
Sbjct: 81  GIDLA----------ATTREAAQVRSDIGMVFQHFNLFPHMSVLDNCLLAPTSVRGLSRK 130

Query: 475 QAEVEARDLLARVGLADKAAAYPRQLSGGQQQRVAIARALALRPKVLLFDEPTSALDPEL 534
            AE  AR  L++VG+  +A  YP QLSGGQQQRVAIARAL ++P+++LFDEPTSALDPE+
Sbjct: 131 DAEERARMYLSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIMLFDEPTSALDPEM 190

Query: 535 VNEVLDVIKELSRSGVTLIIVTHEIGFAREVSDRVVFMEQGRILETGTPDKVFNSPDHPR 594
           V EVLDV+ +L+ +G+T++ VTHE+GFAR+V++RV+F+E G+I+E   P   FN P   R
Sbjct: 191 VAEVLDVLVQLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSPPQVFFNQPRTER 250

Query: 595 TAEFLAKVL 603
              FLA++L
Sbjct: 251 AKAFLAQIL 259