Pairwise Alignments

Query, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  335 bits (859), Expect = 3e-96
 Identities = 203/535 (37%), Positives = 312/535 (58%), Gaps = 23/535 (4%)

Query: 3   NLVEIRGLKVEATTDSGRRI-QIIRGVDIDIAEGEIVALIGESGSGKTTIA---LTLMGY 58
           NL+E+R L VE  T  G ++ +++ GV  DI +GE +AL+GESGSGK+  A   L L+ Y
Sbjct: 5   NLIEVRDLAVEFVT--GDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPY 62

Query: 59  ARPGCRISGGSVTVAGRDMVQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVT 118
             P  R   GS+   G+D++Q SE    +IRG +I+ + Q    + NP   I  Q+ E+ 
Sbjct: 63  --PLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120

Query: 119 RIHDLMPPQEARRRAVELFKALSLPNPETIGERYPHQVSGGQLQRLSAAMALIGNPELVI 178
            +H  +  +EA  R +EL   + +P P    +  PH++SGGQ QR+  AMAL   PEL+I
Sbjct: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 179 FDEPTTALDVTTQIEVLRAFKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETG 238
            DEPTTALDVT Q+++L   K    + G+  + +SHDL +V +IA R+ V++ G+I E  
Sbjct: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240

Query: 239 TTTDILENAQHPYTRELLTAFNDKVRTVAPLKQNGAKPLLDIEKLIA------GYGTKGD 292
               +  + QH YT+ L+ A    +    P+      PLL+++ L        G+  +  
Sbjct: 241 ECATLFSSPQHHYTQMLINAEPSGLPAHNPV----GAPLLEVDDLKVWFPIKKGFLQRTV 296

Query: 293 DHMPLVRAVDSVSLAVYPGRNLGIIGESGCGKSTLARAIAGILPAASGHVIFEGRQLDAD 352
           DH   V+AVD V+ ++  G+ LGI+GESG GKSTL  AI  ++ ++ G + F G+ L+  
Sbjct: 297 DH---VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLI-SSQGGIRFHGQNLEGL 352

Query: 353 ARRRTSDQLRRMQIVFQYADTALNPAKSIEDILGRPLAFYHSLKGKARDARIDQLLDMVK 412
            ++      R MQ+VFQ    +L+P   + DI+G  L  +     + ++A I   L+ V 
Sbjct: 353 NQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVG 412

Query: 413 LPRSVRHRHPSGLSGGQKQRVNFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQR 472
           L    RHR+P   SGGQ+QR+  ARAL  +P+LI+ DE TSALD  V   +++LL  LQ+
Sbjct: 413 LDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQ 472

Query: 473 ELNLSYIFISHDLSVVESICDEIVVMYGGQKVEHLETDAI-KSPTHPYSKLLFSS 526
           + NL+Y+FISHDL+VV+++  +++V+  G  VE  +  AI  +P HPY++ L  +
Sbjct: 473 KYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527