Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  148 bits (374), Expect = 1e-40
 Identities = 83/265 (31%), Positives = 140/265 (52%), Gaps = 6/265 (2%)

Query: 16  YKINAVGIFAFLVIFIWAMVAIFAPYLIPYPVGDIVDLDYFGPM------TSDLWLGSDY 69
           +  N   +   + I +  +VA+FAP++ P+   +     +  P       ++   LG+D 
Sbjct: 27  FSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLGTDA 86

Query: 70  LGRDVFSRILMGARFTVGISLAAVTIACVSGVVLGMCAAVVGGWFDAMLSRFLDAVNSIP 129
           +GRD+ SR++ GAR ++ I +A V ++ V GVVLG+ A    G  +  + R +D V ++P
Sbjct: 87  IGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVLTLP 146

Query: 130 SKLFGLVVVAAVGSSIPVLIVTLSVIYTPGAYRFARALAVNVNTMDFVTVARVRGESLLY 189
           S L  +V+VA +G  +   ++ ++++  P   R  RA  +   + D+VT ARV G   L 
Sbjct: 147 SLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAGTLR 206

Query: 190 LISSEILPNIIRPVLADLGVRFVFIVLLLSGLSFLGLGLQPPNADWGALVRENIGGLPFA 249
           L+  E+LPN   P++    +     +L  + L FLGLG QPP+ +WG ++ +    +  A
Sbjct: 207 LMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFVLRA 266

Query: 250 APAVIFPSLAIASLTISVNLLIDNL 274
              V FP LAI    ++ NLL D L
Sbjct: 267 WWVVTFPGLAILMAVLAFNLLGDGL 291