Pairwise Alignments

Query, 166 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)

Query: 10  YNAYVAHRVDLIKYATLILGSRADAEDVVQEAFLKFVPEGSGNPTNLKSYLFRIVRNLAL 69
           +  ++ H  +LI   T  L SR  AED+  +AF++ +          ++YL +  RN+A+
Sbjct: 4   HKGFLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQVEQPRAYLHQAARNIAV 63

Query: 70  DNRRRSRQDLRERPDDTPFWGMPQDNGTPEEHALFCDEVRQMQTILAGLPVQARVALEMH 129
           D  R  R+D R+  +   F      +G PE +    +    ++  LA LP+  R      
Sbjct: 64  DGFR--REDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQ 121

Query: 130 RFGGYNMEEIARHLGVS 146
           +  G    EIA  +G+S
Sbjct: 122 KLEGLTQAEIAERMGLS 138