Pairwise Alignments

Query, 331 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 90/313 (28%), Positives = 140/313 (44%), Gaps = 20/313 (6%)

Query: 4   DPDNKIELPTGKAEEAADWLLRLQGGATEPRLKAEFERWLAASQENRLAWERTCKIWRNL 63
           +PD+ I       + AA W +RL         +  F  WLAA   +   ++   +IW+  
Sbjct: 9   NPDDAI------TDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTA 62

Query: 64  GLVEPEFKNLWEDAAHLPGKAAINPTRRRWSVRHYAGAAVAAASLCLVVLFIPTFSVRLE 123
            L+ P    + +   + P + A  P  R W  R  A AA  A ++  +  ++      L 
Sbjct: 63  DLL-PRSATVID--FNPPARHAARP--RNW--RPLASAAAIALAVLPLAGWMGWEQGWLP 115

Query: 124 ADYQTSTA--EMRTITLEDGSTVELAAASALSADFRDGRRTVKVLKGEAFFDVVPDKARP 181
             YQ   A   M+T+ L DGSTV+L   + L+      +R V + +GEAFF V  D + P
Sbjct: 116 NHYQHFEAGDRMQTVELSDGSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHP 175

Query: 182 FVVEAKNVTVQVLGTAFDVDLTDGVTQVALAHGSVEASFR-NAPPTRLVPGEMLVVDAAG 240
           F+V A +   +V GT F+V       +V L  GSV  S   +A   RL PG M      G
Sbjct: 176 FIVRAGSGQTRVTGTQFNVWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPG-MQASYHKG 234

Query: 241 AIRKENVPVEDIG---GWRKGELYVVDATIGSVVEQIQRYHPAWLTMADKRLAEQKVTGF 297
               +    +D G    WR G+L + + ++   +  I RY  A L +AD      +++G 
Sbjct: 235 DFEPQLEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGI 294

Query: 298 YDLRDPDRALEAL 310
           Y+ R+  R +  L
Sbjct: 295 YNTREVGRLVNNL 307