Pairwise Alignments

Query, 331 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 311 a.a., transmembrane sensor from Agrobacterium fabrum C58

 Score =  125 bits (313), Expect = 2e-33
 Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 15/308 (4%)

Query: 18  EAADWLLRLQGGATEPRLKAEFERWLAASQENRLAWERTCKIWRNLGLVEPEFKNLWEDA 77
           EA  W++R+  G           RW + S  +  A++++ ++W+NLG    E +      
Sbjct: 12  EATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNLGSALGETRKT---- 67

Query: 78  AHLPGKAAINPTRRRWSVRHYAGAAVAAASLCLVVL-FIPTFSVRLEADYQTSTAEMRTI 136
                 +A   TRR +       A  A   + L  L F+P+    L ADY T   E RT+
Sbjct: 68  ------SASTVTRRSFIAAGSVAAGAAGVGVVLSELGFLPSVDAML-ADYATGVGEQRTV 120

Query: 137 TLEDGSTVELAAASALSADFRDGRRTVKVLKGEAFFDVVPDKARPFVVEAKNVTVQVLGT 196
            L DGST  L   + LS D+    R + +  G A FDVV D ARPFVV A N      GT
Sbjct: 121 ELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDAARPFVVTAANGDTTATGT 180

Query: 197 AFDVDLTDGVTQVALAHGSVEASFRNAPPTRLVPGEMLVVDAAGAIRKENVPVEDIGGWR 256
           +F V   +    +    G +  + +    ++L  GE +    AG  +K    +E    WR
Sbjct: 181 SFSVKHGEEDVSIECLEGHI--TVQCLGDSQLNGGEGISYSRAGLGKKVAADIETAAAWR 238

Query: 257 KGELYVVDATIGSVVEQIQRYHPAWLTMADKRLAEQKVTGFYDLRDPDRALEALVEPYSG 316
           +G L   D  +  VV  + R+    + +A   L  ++++G + L  PD  L  L E    
Sbjct: 239 RGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHLEETLQV 298

Query: 317 K-VHAIGG 323
           + V  +GG
Sbjct: 299 RPVSLVGG 306