Pairwise Alignments

Query, 615 a.a., rhizobicin secretion from Agrobacterium fabrum C58

Subject, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

 Score =  225 bits (573), Expect = 6e-63
 Identities = 164/548 (29%), Positives = 277/548 (50%), Gaps = 22/548 (4%)

Query: 29  VALVSGVVNILALTSPLFMLQVYDRVLASGSLPTLV---GLALLALGLYGFQCLLDIIRA 85
           V + S V N+LAL   LF +QVYDRV+ + SLPTL    G  +LAL    F   + ++R 
Sbjct: 179 VMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALV---FDFSMRLLRL 235

Query: 86  RVLIRIGEDFDMRYSGRVHDAVVRL--PLVNRMPGDGLQPLRDLDNVRGFLSGTGPTAFF 143
           +V   +G+  D+R S  V+   +RL   +  +  G  +  LR+L+++R  ++ +  T   
Sbjct: 236 KVTDLLGKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLA 295

Query: 144 DLPWMPLYLGLCFLFHVWIGVTALAGAVLLVSLTILTNIFSQKPI----RDTMVENMARN 199
           DLP+  L+L   F+F +  GV      V L+++ +L  + +Q+ +      +M E+  RN
Sbjct: 296 DLPFFLLFL---FVFWLIGGVLVFIPLVALLAM-VLPGLLAQRRLARLANASMRESALRN 351

Query: 200 RQLEASRRNAEVVQAMGLGRRLGKRWQSSNEAYLAANRKAGDVAGGLGNLAKSLRVVLQS 259
             L  S +  + ++A+    R  ++W   N A    N +   +  GL    ++++  + +
Sbjct: 352 AMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFA 411

Query: 260 AILAVGAWLVIRQEASGGVMIASSIMMGRALAPVDL---AISNWKSFVAARQSWARLREL 316
            ++ +GA +VI  + + G ++A+S++  R +AP+      ++ W+    A Q   +L + 
Sbjct: 412 VVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQS 471

Query: 317 FAQMPANAAAMALPKPEKELRVENVTIVPPGERKPTVTGLGFV-VTAGNALGIIGPSGSG 375
               P   A + LP    E R+         E  P V  +G + +  G  + ++G +G+G
Sbjct: 472 PVDHPEGEARVHLPAIHGEYRLRQANF-RYSEDYPPVLNIGRLDIQPGERIAVLGRNGAG 530

Query: 376 KSTLARILTGAWMPAAGKVRLDGASFDQWDRETLGRHIGYLPQGVELFDGTIGENISRFD 435
           KSTL + L GA     G++ LDG +    D   L R +G LPQ   LF GT+ EN++   
Sbjct: 531 KSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGA 590

Query: 436 DNPDPEAIIAAARAAGAHELILRFEKGYDSDIGEAGSTLSAGQRQRIGLARALYGDPFIV 495
                + ++AA  A GA + + R  KG D  I E G  LS GQRQ + L+R L   P ++
Sbjct: 591 GQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVL 650

Query: 496 VLDEPNANLDAEGEAAVVKAITSVKARGGIAVVVAHRPSAIGAVDYILMMEDGRMKAFGP 555
           +LDEP A+LD   E  ++  +     +G   V+  HR S +  VD IL+++ GR+     
Sbjct: 651 LLDEPTASLDDMTERKLLDNLERF-CQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDA 709

Query: 556 RDEVLSKV 563
           RD  L+K+
Sbjct: 710 RDAALAKL 717