Pairwise Alignments

Query, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 3e-35
 Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 55/415 (13%)

Query: 26  AALLAGVGGWAATTNLAGAVVASGHLVVDSYTKKVQHPKGGVVGEILVNEGERVKAGDVV 85
           AA+LA +  WA    L      +G +V  S  + +Q  +GG++ ++ V EG+ V AG V+
Sbjct: 54  AAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGDIVSAGQVL 113

Query: 86  MRLDATQTRANLAIVTKRLDELGARMARLEAERDDLAELIFPQALIARRDDPDVASAMRS 145
            +LD T+T + +     R+    A  ARL AE +    L+FP  +   R +P +   +R+
Sbjct: 114 AQLDRTKTESTVQESASRVRAALAMSARLTAEVNG-TPLVFPDEV---RGEPGL---VRT 166

Query: 146 ETKLFEFRKSYREGRKAQLAERITQFEHEIEGLKAQEVAYDNGLAVLEAEITSQKSLREQ 205
           ET L++ R+               Q    + G+    V     LA+ E  + S+ +  + 
Sbjct: 167 ETALYQSRRE--------------QLASSLAGVNQALVLMRRELALTEP-LVSRGAASDV 211

Query: 206 GVVSVQR-LNSLQTQAATFGGERGEKIAYQAQTAGRITETKLQILQIDQELRTEVGRELR 264
            V+ ++R +N  +T+AA    +   K                         R ++ +   
Sbjct: 212 EVLRLKRQINEAETKAADLRSQYYVKA------------------------REDLAKANA 247

Query: 265 EIQAQMGEFVERKVAAEDELKRIDIVAPQSGMVHEMAVHTVGGVVTPADPIMLIVPDGDE 324
           EI+AQ      R     D L R+   +P  G+V ++ V TVGGV+ P   +M IVP  ++
Sbjct: 248 EIEAQRSVTRGRS----DSLTRLTFASPVRGIVKDIVVTTVGGVLPPGGKLMEIVPLDEK 303

Query: 325 LALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEGHVSRIAAD-ITTDQRTGLSYYL 383
           L +E +I P+D+  +  GQ A +++TA++  +   L G V+ I+ D I  D +  + YY 
Sbjct: 304 LLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQDDVKRDVYYYR 363

Query: 384 ARISVPVSEREKLN--NAPLVPGMPAEAFIQTSERTALSYIAKPLTDQISRAFRE 436
             I       +  +  + P+VPGM A   I T  +T L Y+ KPL ++ S A RE
Sbjct: 364 VYIRTDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLIKPL-NKASEALRE 417