Pairwise Alignments

Query, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  252 bits (644), Expect = 1e-71
 Identities = 154/435 (35%), Positives = 231/435 (53%), Gaps = 5/435 (1%)

Query: 3   NIDQRTQVSRSIRKHLLAGLAAGAALLAGVGGWAATTNLAGAVVASGHLVVDSYTKKVQH 62
           N D      R IR+    GL          G WAA   L+ AV  +G + V +Y K VQH
Sbjct: 12  NFDDLPTSDRGIRR---IGLTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQH 68

Query: 63  PKGGVVGEILVNEGERVKAGDVVMRLDATQTRANLAIVTKRLDELGARMARLEAERDDLA 122
            +GG+V E+   +G+ VK GD ++ LD +Q  A       +L     + ARL AERD L 
Sbjct: 69  LEGGIVKELHARDGDLVKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLD 128

Query: 123 ELIFPQALIARRDDPDVASAMRSETKLFEFRKSYREGRKAQLAERITQFEHEIEGLKAQE 182
            +  P  ++   D      A+  E ++F+ R     G  +   ERI Q + +I GL    
Sbjct: 129 SI--PSVIMEGTDSDRAQEALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMI 186

Query: 183 VAYDNGLAVLEAEITSQKSLREQGVVSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRIT 242
                       EI   K L  +G V  QRL   + +      E  +  +   +T  +I 
Sbjct: 187 RTKAGLNKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIG 246

Query: 243 ETKLQILQIDQELRTEVGRELREIQAQMGEFVERKVAAEDELKRIDIVAPQSGMVHEMAV 302
           ET+LQI+Q+ ++   +V +EL ++QAQ+ +  E++ A  D L R+ I AP+SGMV +M V
Sbjct: 247 ETELQIVQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKV 306

Query: 303 HTVGGVVTPADPIMLIVPDGDELALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEG 362
           HT+GGVV+ A P++ IVP   +L +E ++ P+DID+L++G+ A +R +AFNQ  TP +EG
Sbjct: 307 HTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEG 366

Query: 363 HVSRIAADITTDQRTGLSYYLARISVPVSEREKLNNAPLVPGMPAEAFIQTSERTALSYI 422
            ++RI+AD   ++R+G  YYL R+ V     +KL N  L PGMPAE  I   +RT L Y+
Sbjct: 367 KLTRISADSLVEERSGDQYYLVRVKVTEDGMKKLGNRKLQPGMPAEVLINAGDRTMLQYL 426

Query: 423 AKPLTDQISRAFREE 437
            KP  +  + +  EE
Sbjct: 427 LKPARNMFAESLIEE 441