Pairwise Alignments

Query, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 3e-35
 Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 55/415 (13%)

Query: 26  AALLAGVGGWAATTNLAGAVVASGHLVVDSYTKKVQHPKGGVVGEILVNEGERVKAGDVV 85
           A +LA    WAA   +      +G ++  S  + +Q  +GG+V ++ V EG+ V+ G V+
Sbjct: 30  ALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVL 89

Query: 86  MRLDATQTRANLAIVTKRLDELGARMARLEAERDDLAELIFPQALIARRDDPDVASAMRS 145
            +LD T+T +++     +     A  ARL+AE      L FP++L   RD PD+  A   
Sbjct: 90  AQLDPTKTASSVGESEAKYRAARASQARLQAEVTG-KPLTFPESL---RDSPDLIDA--- 142

Query: 146 ETKLFEFRKSYREGRKAQLAERITQFEHEIEGLKAQEVAYDNGLAVLEAEITSQKSLREQ 205
           ET L++ R+                      GL+       + L ++ +E+   ++L + 
Sbjct: 143 ETALYQTRR---------------------RGLEQTLAGIQDSLQLVRSELKITENLAKM 181

Query: 206 GVVSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRITETKLQILQIDQELRTEVGRELRE 265
           G  S   +  L  Q +                     E +L+  +   +       EL +
Sbjct: 182 GASSRVEVIRLNRQRS---------------------ELELKANEARSDYLVRAREELAK 220

Query: 266 IQAQMGEFVERKVAAEDELKRIDIVAPQSGMVHEMAVHTVGGVVTPADPIMLIVPDGDEL 325
             A+     E      D L R+ + +P  G+V ++ V+T+GGVV P   +M IVP  + L
Sbjct: 221 ASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERL 280

Query: 326 ALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEGHVSRIAADITTDQRTGLSYYLAR 385
            +E +I P+DI  +   Q A ++++A++  V   L+G V  I+ D   D+     YY  R
Sbjct: 281 LIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYY-R 339

Query: 386 ISVPVSEREKLNNA----PLVPGMPAEAFIQTSERTALSYIAKPLTDQISRAFRE 436
           + +   +    N A     +VPGM A   I+T E+T L Y+ KPL ++   A RE
Sbjct: 340 VFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL-NRAKEALRE 393