Pairwise Alignments

Query, 314 a.a., peptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  232 bits (592), Expect = 8e-66
 Identities = 128/332 (38%), Positives = 198/332 (59%), Gaps = 21/332 (6%)

Query: 1   MIRFILSRLLMALPTIAFVSITVFALIRFIPGDPAALMLGDMAQPEQIEAMRTE-LGLDK 59
           M+ FI  RL + +PT   +++  FALIR IPGDP  +M+G+     ++ A   E LGL+K
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 60  SMLQQFVIWAGNVVQGDFGRSIVNDEAVLPLVVSRFLVSAEIVVVAVLLASLIAVPAGVI 119
            +  Q++ + G + QGD G S+   E+V    ++ F  + E+   A+L A ++ + AGVI
Sbjct: 61  PLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVI 120

Query: 120 AAWKQNSLTDLALVGTATLLLSIPTFWLGLLLLLFFGLKLGWLPVLGYVSIS-------- 171
           AA K+ SL D  ++G +    S+P FW GL+L++FF + LGW PV G + +         
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTG 180

Query: 172 ----DNLVG--------GMLYLVLPVMTLVIHEMGVLIRMARASTLEVLRLDYITHARAK 219
               D L+          +++L+LP + L    + V+ RM R+S LEVLR DYI  ARAK
Sbjct: 181 FMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAK 240

Query: 220 GLSESAVLWRHAFKNAFGPTWTMIGLILGNLLGGIAVIETVFTIPGLGRLMVDSIFARDY 279
           GLS + V++ H  +NA  P  T+ GL +G LL G  + ET+F+ PG+G+ ++++I ARDY
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 280 PVIQGCLLFVSLSYVLVNLFVDLLYPLFDPRV 311
           PV+Q  +L ++   +LVN  VD+LY L +PR+
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGLANPRI 332