Pairwise Alignments

Query, 314 a.a., peptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Escherichia coli ECRC62

 Score =  226 bits (577), Expect = 5e-64
 Identities = 132/335 (39%), Positives = 194/335 (57%), Gaps = 24/335 (7%)

Query: 1   MIRFILSRLLMALPTIAFVSITVFALIRFIPGDPAALMLGDMA-QPEQIEAMRTELGLDK 59
           M++FIL RL + +PT   +++  FA +  IPGDP  +M G+    PE+   +  ELGLDK
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60

Query: 60  SMLQQFVIWAGNVVQGDFGRSIVNDEAVLPLVVSRFLVSAEIVVVAVLLASLIAVPAGVI 119
            M QQ++ +   V+ GD G S+ +   V    V RF  + E+ V A++ A+ + +P GV+
Sbjct: 61  PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120

Query: 120 AAWKQNSLTDLALVGTATLLLSIPTFWLGLLLLLFFGLKLGWLPVLGYVSI------SDN 173
           AA K+ S+ D   VG A    S+P FW G++L++   +     PV G VS       S+ 
Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180

Query: 174 LVGGML-----------------YLVLPVMTLVIHEMGVLIRMARASTLEVLRLDYITHA 216
           L G ML                 +++LP + L    + V++RM R+S LEVL  DYI  A
Sbjct: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240

Query: 217 RAKGLSESAVLWRHAFKNAFGPTWTMIGLILGNLLGGIAVIETVFTIPGLGRLMVDSIFA 276
           RAKGL+   V+  HA +NA  P  T+IGL +G LL G  + ET+F+ PGLGR ++D++  
Sbjct: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 277 RDYPVIQGCLLFVSLSYVLVNLFVDLLYPLFDPRV 311
           RDYPV+QG +L V+   +LVNL VDLLY + +PR+
Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335