Pairwise Alignments

Query, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  216 bits (550), Expect = 4e-61
 Identities = 112/258 (43%), Positives = 160/258 (62%), Gaps = 1/258 (0%)

Query: 12  GILIALLLITAITGLFWTPYDPMKLGFASRLAAPGAGHLLGTDEFGRDVLSRLMVGARAS 71
           G+L+ ++L+     L   PYDP++   A RL  P A   LGTD +GRDVLSRL+ G R S
Sbjct: 30  GLLVMIVLVALFAPLI-APYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIYGTRVS 88

Query: 72  VWIGFLTVSFATICGTLIGLVSGYARGWVDGVIMAINNALLAFPGILLALGLLAVFGANQ 131
           + +GF+ V  A + G+ +G+++GY  G  D +I    + LL+FP +LL L + A+ GA+ 
Sbjct: 89  LLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGASL 148

Query: 132 YGIIFALGIAYTPSMARVVRGAVLSLREREFIEASLVMGNGEIYTMFRHILPNCIAPITV 191
             +I A+ I       R+ R   ++L++R+F+EA   +G G    M  HILPN I+ + V
Sbjct: 149 ENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEVLV 208

Query: 192 LATSMFGWAILSESALSFLGLGVPPPAPTWGNMLAAGRPFIQQAVWLGLFPGLCIALTLL 251
           L       AI +E++LSF+GLGVPPPAPTWG+M+  G   I  A WL +FP L I LT+L
Sbjct: 209 LGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLTVL 268

Query: 252 GINLLGDALRDRLDPRMR 269
            ++LLGDALRD  DP+ R
Sbjct: 269 ALSLLGDALRDANDPKTR 286