Pairwise Alignments

Query, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  194 bits (492), Expect = 3e-54
 Identities = 108/267 (40%), Positives = 160/267 (59%), Gaps = 6/267 (2%)

Query: 9   LIGGILIALLLITAITGLFWTPYDPMKLGFASRLAAP-----GAGH-LLGTDEFGRDVLS 62
           ++G   + L++  A+   +  P+DP +      L  P     G    +LGTDE GRD+LS
Sbjct: 39  VMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLS 98

Query: 63  RLMVGARASVWIGFLTVSFATICGTLIGLVSGYARGWVDGVIMAINNALLAFPGILLALG 122
           RL+ GAR S+ IG  +V  + I G L+GL++G+    +   IM + + +LA P +LLA+ 
Sbjct: 99  RLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVA 158

Query: 123 LLAVFGANQYGIIFALGIAYTPSMARVVRGAVLSLREREFIEASLVMGNGEIYTMFRHIL 182
           ++A+ G      + A+ I   PS  R+ R AV+    R+++ A+ + G G    MF  +L
Sbjct: 159 IVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVL 218

Query: 183 PNCIAPITVLATSMFGWAILSESALSFLGLGVPPPAPTWGNMLAAGRPFIQQAVWLGLFP 242
           PNC+AP+ V AT  F  AIL  +AL FLGLGV PP P WG MLA+ R +I++A W+   P
Sbjct: 219 PNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLP 278

Query: 243 GLCIALTLLGINLLGDALRDRLDPRMR 269
           GL I L++L INL+GD LRD LDP+++
Sbjct: 279 GLTILLSVLAINLMGDGLRDALDPKLK 305