Pairwise Alignments

Query, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  403 bits (1036), Expect = e-117
 Identities = 231/531 (43%), Positives = 338/531 (63%), Gaps = 13/531 (2%)

Query: 1   MTDNTLLTVRGLSLE-VAGSG-HRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLL 58
           M++  L+ VR L++E V G   +RVV  VSFDI  GE   +VGESGSGK++   +++ LL
Sbjct: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60

Query: 59  P-PAIAVTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
           P P      GS+ Y+G+D++    + L+R+RG  I ++FQEPMTSLNP   I +Q+ E L
Sbjct: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120

Query: 118 ILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLI 177
           +LH  L+ +E   + LE+L  VGI +P   L A PHE SGG RQR+M+A  +  +P LLI
Sbjct: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQG 237
           ADEPTTALD  +Q  ++EL+ EL    G A+LLISHDL +V R   R+ VM++G IVEQ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240

Query: 238 RTEDLLDAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKAKPK 297
               L  +P+H YT+ L+++ P  G P + +   AP++    + V +  +K  L++    
Sbjct: 241 ECATLFSSPQHHYTQMLINAEP-SGLP-AHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDH 298

Query: 298 -RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE----RNEDW 352
            +A+ GV+  + +G+ + +VG SGSGK+TLG  I  L+  S+G IRF G+       +  
Sbjct: 299 VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLI-SSQGGIRFHGQNLEGLNQKAV 357

Query: 353 NDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPGLDQAAKRKRA-LETLEEVGLGVD 411
              R   Q+VFQDP+ SL PRM +  +V E LR +  +  A +++ A +  LEEVGL   
Sbjct: 358 RPLRREMQVVFQDPFGSLSPRMCVADIVGEGLR-IHRIGTAQEQEAAIIAALEEVGLDPR 416

Query: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471
              RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L  +LQ++Y  
Sbjct: 417 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNL 476

Query: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSA 522
           + LFISHDL VV+ ++ +++V++ G ++E+GD   IF +P+  YTR+LL A
Sbjct: 477 TYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527



 Score =  176 bits (445), Expect = 3e-48
 Identities = 106/268 (39%), Positives = 156/268 (58%), Gaps = 18/268 (6%)

Query: 270 SKAPMVSARGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRT 329
           S+  ++  R + V++     +       R + GVS DI +GE +ALVG SGSGK+    +
Sbjct: 2   SEQNLIEVRDLAVEFVTGDQV------NRVVDGVSFDIRKGETLALVGESGSGKSVTAHS 55

Query: 330 IAGLV-----KESEGHIRFQGRE--RNEDWNDYRLN---CQMVFQDPYSSLDPRMTIQAL 379
           I  L+     +   G IR++G++  +  +    R+      M+FQ+P +SL+P   I+  
Sbjct: 56  ILRLLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQ 115

Query: 380 VEEALRLVPGLDQAAKRKRALETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARR 437
           + E L L  GL       R LE L+ VG+          PHELSGGQRQRV IA A+A  
Sbjct: 116 INEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANE 175

Query: 438 PRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGR 497
           P  LIADEP +ALDVTV+ ++L+L  +LQ R G + L ISHDL +V ++A RV VMQ G+
Sbjct: 176 PELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQ 235

Query: 498 IIEEGDRDTIFDSPREAYTRRLLSAIPA 525
           I+E+ +  T+F SP+  YT+ L++A P+
Sbjct: 236 IVEQAECATLFSSPQHHYTQMLINAEPS 263