Pairwise Alignments

Query, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  422 bits (1086), Expect = e-122
 Identities = 230/555 (41%), Positives = 341/555 (61%), Gaps = 33/555 (5%)

Query: 6   LLTVRGL--SLEVAGSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIA 63
           +L+V+ L  S  V G    VV+++SFDIAP E   IVGESGSGK++ + +++ LL    +
Sbjct: 18  VLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLLDRKTS 77

Query: 64  VTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKL 123
              G V+  G+D+++LP  E+R++RG +I ++FQEPMTSLNP   IG+Q+ E L +H  +
Sbjct: 78  RIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEALTVHQDI 137

Query: 124 SPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183
           S    + +++ +L +V I +       YPH+FSGGMRQR+M+A  +  KP LLIADEPTT
Sbjct: 138 SSSAAKAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLIADEPTT 197

Query: 184 ALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTEDLL 243
           ALD  IQ  +++L+ +L   EG +VL I+HD+ +VA    R +VM +G +VE G T+D+ 
Sbjct: 198 ALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETGTTDDIF 257

Query: 244 DAPRHPYTKKLLSSLPFRGEPRS--------------------------IDTSKAPMVSA 277
              +HPYT+ LLS++P  G  RS                          +   K P++S 
Sbjct: 258 HRGQHPYTRALLSAVPKLGSMRSRLLPARFPIIDIKTGESPPVVETKDTVSGGKTPILSV 317

Query: 278 RGIVVDYAGRKSLL-KKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKE 336
           + +   +  R  L  +K+    A+  VS D+ EGE ++LVG SG GK+T GR+I  L++ 
Sbjct: 318 KDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSITRLIEP 377

Query: 337 SEGHIRFQGRE----RNEDWNDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPGLDQ 392
           + G++   G E            R + QMVFQDP++SLDPRM++   + E         +
Sbjct: 378 TSGNVTLDGYEVLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEHRLGQK 437

Query: 393 AAKRKRALETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDV 452
           A  R++A + LE+VGL  D   R+PHE SGGQRQR+AIAR++   P+ ++ADE VSALDV
Sbjct: 438 AQAREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAVSALDV 497

Query: 453 TVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPR 512
           +++AQV +L  DLQ+    + LFISHD+ VVE+V+ RV VM  G I+E G R  +FD+P+
Sbjct: 498 SIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNPQ 557

Query: 513 EAYTRRLLSAIPALD 527
             YT++L+SA+P  D
Sbjct: 558 HPYTKKLMSAVPVPD 572