Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 306 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  229 bits (584), Expect = 6e-65
 Identities = 126/309 (40%), Positives = 196/309 (63%), Gaps = 8/309 (2%)

Query: 1   MKKFI-IGAAMSVLLGTAAHAET--VGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQVE 57
           MK+++ I  + S+L    A A T  +GV MA ++DNF T+LR+G+ +    L    + +E
Sbjct: 1   MKQWLSISLSASLLFAGLAQAATPLIGVGMAKYNDNFQTILRHGV-EKQVALLDADIFME 59

Query: 58  DAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDS 117
           + Q+DV  Q  Q +N + SKVDAI+V  V   +   M +LA +AK+PLV+VNR P    +
Sbjct: 60  NGQDDVELQMRQFRNLVNSKVDAIVVAMVSGKSAPEMMRLANEAKVPLVFVNRNPEPA-T 118

Query: 118 LPDGQAFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTDE 177
            P   AFV SDE  +GTL+ +E+ R    KGN VI++G+ SN+++ MRT+  + V+   +
Sbjct: 119 WPALTAFVGSDELESGTLQMEELARRANYKGNVVILVGDPSNKSSVMRTEDVEKVVA--K 176

Query: 178 CKGISVVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMKS 237
              + VV+++  NW+R+Q + +V  W+  G++F+ + ANNDEMAIGAI  L+  GK    
Sbjct: 177 YPDMKVVQKKIGNWERSQAATIVIEWVKQGVDFSIIAANNDEMAIGAIMGLEKTGKKAGD 236

Query: 238 YVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKV-YIPFQL 296
           Y+V G+D T D L  M  G + V+VFQDA GQ  GA+DAA+++ +G+ +   V ++PF+L
Sbjct: 237 YLVGGIDGTPDGLKLMAEGKMAVSVFQDALGQANGAVDAAMRMARGETLASPVIWVPFKL 296

Query: 297 VTPENVKDY 305
           +TPEN + +
Sbjct: 297 ITPENRQQF 305