Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECRC101

 Score =  127 bits (318), Expect = 4e-34
 Identities = 85/304 (27%), Positives = 156/304 (51%), Gaps = 14/304 (4%)

Query: 1   MKKF---IIGAAMSVLLGTAAHA-ETVGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQV 56
           MKK    +   A+S  +   A A +T+ + ++  ++ F   L++G    + +L G  L V
Sbjct: 3   MKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKL-GYNLVV 61

Query: 57  EDAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVD 116
            D+QN+ AK+ + +Q+        +++NP D+DA     K+A  A IP++ ++RQ    +
Sbjct: 62  LDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGE 121

Query: 117 SLPDGQAFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTD 176
            +    + +ASD  + G +    + +  G     + + G     AAR R +  +  +   
Sbjct: 122 VV----SHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAH 177

Query: 177 ECKGISVVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMK 236
           +    +V+  Q A++ RT+G +++ N L++  +  AV A NDEMA+GA++AL+ AGK   
Sbjct: 178 K---FNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGK--S 232

Query: 237 SYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVYIPFQL 296
             +V G D T D   A+  G L  T+ Q     G   ++ A K++KG+K++ K  +  +L
Sbjct: 233 DVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKL 292

Query: 297 VTPE 300
           V  +
Sbjct: 293 VVKQ 296