Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 332 a.a., D-galactose-binding periplasmic protein from Escherichia fergusonii Becca

 Score =  142 bits (357), Expect = 1e-38
 Identities = 112/335 (33%), Positives = 167/335 (49%), Gaps = 34/335 (10%)

Query: 2   KKFIIGAAM-SVLLGTAAHAET--VGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQVED 58
           K   + A M S+L G AAHA    +GV++  +DDNF++V+R  +   +K    V L + D
Sbjct: 4   KVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMND 63

Query: 59  AQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVN--VD 116
           +QND +KQ  QI   +A  V A+ +N VD  A   + + A    +P+V+ N++P    +D
Sbjct: 64  SQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALD 123

Query: 117 SLPDGQAFVASDETVAGTLEAKEVCRLLG----------GKGNAVIMMGELSNQAARMRT 166
           S  D   +V +D   +G ++   + +             G+   V++ GE  +  A  RT
Sbjct: 124 SY-DKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEART 182

Query: 167 QSAKDVLKTDECKGISVVEEQ--TANWQRTQGSDLVTNWLS--SGIEFNAVIANNDEMAI 222
                V+K    KGI   + Q  TA W   Q  D +  WLS  +  +   VIANND MA+
Sbjct: 183 TY---VIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAM 239

Query: 223 GAIQALKAAGKDMKSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVK 282
           GA++ALKA  K   S  V GVDA  +ALA +++G L  TV  DA  Q K   D A  L  
Sbjct: 240 GAVEALKAHNK--SSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLAD 297

Query: 283 GD--------KIEKKVY-IPFQLVTPENVKDYVAK 308
           G         KI+ KV  +P+  V  +N+ ++  K
Sbjct: 298 GKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK 332