Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 316 a.a., ABC-type sugar transport system, periplasmic component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 9/286 (3%)

Query: 23  VGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQVEDAQNDVAKQQSQIQNFIASKVDAII 82
           V V ++  ++ +  VL       ++ L G  + + D+QN+ A + +  +N I +   AI+
Sbjct: 34  VAVIVSTLNNPWFVVLAETAAKEAESL-GYEVSIFDSQNNTALENNHFENAITAGYQAIL 92

Query: 83  VNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDSLPDGQAFVASDETVAGTLEAKEVCR 142
            NP D + + +    A++A I +  ++R+ VN  SLP  Q  + SD         K    
Sbjct: 93  FNPTDAEGSVSNVTKASEAGIAVFCMDRE-VN-SSLPTSQ--ILSDNYAGCVSLGKYFVD 148

Query: 143 LLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTDECKGISVVEEQTANWQRTQGSDLVTN 202
            L   GN V ++G + +     R++    V+       + +V +Q+A++ R +  +++ +
Sbjct: 149 QLDKSGNYVEILGLVGDNNTWNRSKGFHSVV--GHYPDLKMVAQQSADFDRNKAMEVMES 206

Query: 203 WLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMKSYVVAGVDATQDALAAMQAGDLDVTV 262
            L    + +AV   ND MA+GA QALKAAG +    +V G D   D + A++ G +  T 
Sbjct: 207 ILQVHRDIDAVFCGNDAMAMGAYQALKAAGLE-NQVMVFGFDGAADVVDAVKDGRIAATA 265

Query: 263 FQDAAGQGKGALDAALKLVKGDK-IEKKVYIPFQLVTPENVKDYVA 307
            Q      K A   A K ++G++   KK+ +  +LVT  NV+ Y A
Sbjct: 266 MQFPKVMAKTAAQLADKYIQGERDFVKKLPVDVELVTLANVEHYAA 311