Pairwise Alignments

Query, 309 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score =  135 bits (341), Expect = 9e-37
 Identities = 88/302 (29%), Positives = 150/302 (49%), Gaps = 9/302 (2%)

Query: 9   AMSVLLGTAAHAETVGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQVEDAQNDVAKQQS 68
           A+S+    AA  + +G+++A    NF   ++  + +   + +G+ +   DA+ D   Q +
Sbjct: 15  ALSLGSANAAEVKKIGLAVANLQANFFNQIKQAV-EAEAKTRGIAVVTVDAKGDGPTQVN 73

Query: 69  QIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDSLPDGQAFVASD 128
           QIQ+ +   +DA+I  P    A     KLA  A +P++ ++R   N D  P G  F+A+D
Sbjct: 74  QIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDR---NADGAP-GDTFLATD 129

Query: 129 ETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTDECKGISVVEEQT 188
              +       + +  GG G  VI+ G+        RT+   + +K +   G+ +V EQ 
Sbjct: 130 SVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESVKANS--GVKIVAEQW 187

Query: 189 AN-WQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMKSYVVAGVDATQ 247
           +N W + +G  ++ N L +  + + V A  D +A+GA QA+K A    K  VV G D   
Sbjct: 188 SNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQK-IVVGGFDGDT 246

Query: 248 DALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVYIPFQLVTPENVKDYVA 307
            AL A++ G  DVT  Q     G+ A++ A+K+V G+K+         L T ENV  ++A
Sbjct: 247 AALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSDATLTTKENVAGFIA 306

Query: 308 KN 309
            +
Sbjct: 307 NH 308