Pairwise Alignments

Query, 513 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Erwinia amylovora T8

 Score =  439 bits (1129), Expect = e-127
 Identities = 228/489 (46%), Positives = 325/489 (66%), Gaps = 1/489 (0%)

Query: 23  LLAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRL 82
           LL   GI K FPGV AL      +  G V AL+GENGAGKST+MK+L GIY  D G    
Sbjct: 4   LLQLKGIDKSFPGVKALSGAALSVYPGRVMALVGENGAGKSTMMKVLTGIYPRDAGSFVW 63

Query: 83  KGAPIRLDSPLDALENGIAMIHQELNLMAYMTVAENIWIRREPKNRLGFIDHGEMYRRTE 142
            G     + P  + E GI +IHQELNL+  ++VAENI++ REP  R G I   +MY   +
Sbjct: 64  LGQETTFNGPKASQEAGIGIIHQELNLIPSLSVAENIFLSREPVTRFGRIQWKKMYAAAD 123

Query: 143 TLLERLGIDLDPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRI 202
            LL+RL +       VGELS+  RQMVEIAK +SY S V++MDEPT ALT+ E   LFR+
Sbjct: 124 ALLQRLNLRFRSHRLVGELSIGDRQMVEIAKVLSYESKVIVMDEPTDALTDTETASLFRV 183

Query: 203 IRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGREIT 262
           I +L+ RG GIVYI+H+M E+FEI D+ ++FRDG++I  +  T +  D +I MMVGR + 
Sbjct: 184 IGELKARGCGIVYISHRMKEIFEICDDVTIFRDGQFIAEYKVTALNEDSLIEMMVGRRLE 243

Query: 263 QMFPKEEVPIGDVVLSVKNLNLDGVFHDVSFDVRAGEILGVAGLVGSGRSNVAETVFGVT 322
           + +P+     G+V L V+NL+  GV  +VSF +R GEILGVAGL+G+GRS + + ++G  
Sbjct: 244 EQYPRLNKAPGEVRLKVENLSGPGV-ENVSFSLRKGEILGVAGLMGAGRSELMKVLYGAL 302

Query: 323 PASSGTISIDGKPVSIDSPTTAISHRMAFLTEDRKDTGCLLILNILENMQIAVLQDKYVA 382
           P S G ++++GK V   SP   +++ + +++EDRK  G +L +++ ENM +  L D    
Sbjct: 303 PRSKGRVTLEGKAVVARSPQEGLANGIVYISEDRKHDGLVLGMSVKENMSLTALNDFSYG 362

Query: 383 NGFVQENALSEACEEMCRKLRVKTPHLYERIENLSGGNQQKVLIGRWMLTKPRILILDEP 442
            G ++     +A  +     +VKTP + + I  LSGGNQQKV I R ++T+P++LILDEP
Sbjct: 363 AGRLKHAQEQQAVGDFITLFKVKTPSMDQAIGLLSGGNQQKVAIARGLMTRPKVLILDEP 422

Query: 443 TRGIDVGAKAEIHKLVCEMARQGVAVIMISSEMPEVLGMSDRVMVMHEGRVTGFLARSEA 502
           TRG+DVGAK EI++L+ +  ++G+++I++SS+MPEVLGMSDRV+VMHEGR++G     +A
Sbjct: 423 TRGVDVGAKKEIYQLINQFKQEGLSIILVSSDMPEVLGMSDRVLVMHEGRLSGDFPIEQA 482

Query: 503 TQVKVMDLA 511
           +Q  +M  A
Sbjct: 483 SQEILMAAA 491



 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 9/232 (3%)

Query: 34  PGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRLKGAPIRLDSPL 93
           PGV   ++V F L++G +  + G  GAG+S LMK+L G      G + L+G  +   SP 
Sbjct: 266 PGV---ENVSFSLRKGEILGVAGLMGAGRSELMKVLYGALPRSKGRVTLEGKAVVARSPQ 322

Query: 94  DALENGIAMIHQELN---LMAYMTVAENIWIR--REPKNRLGFIDHGEMYRRTETLLERL 148
           + L NGI  I ++     L+  M+V EN+ +    +     G + H +  +     +   
Sbjct: 323 EGLANGIVYISEDRKHDGLVLGMSVKENMSLTALNDFSYGAGRLKHAQEQQAVGDFITLF 382

Query: 149 GIDLDP-ETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRIIRDLR 207
            +     +  +G LS  ++Q V IA+ +     VLI+DEPT  +     + ++++I   +
Sbjct: 383 KVKTPSMDQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFK 442

Query: 208 ERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGR 259
           + G+ I+ ++  M E+  ++D   V  +G+  G       +++ ++   VG+
Sbjct: 443 QEGLSIILVSSDMPEVLGMSDRVLVMHEGRLSGDFPIEQASQEILMAAAVGK 494