Pairwise Alignments

Query, 513 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 505 a.a., ribose ABC transporter ATP-binding protein RbsA from Dickeya dianthicola ME23

 Score =  441 bits (1134), Expect = e-128
 Identities = 227/489 (46%), Positives = 327/489 (66%), Gaps = 1/489 (0%)

Query: 23  LLAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRL 82
           LL   GI K FPGV AL     ++  G V AL+GENGAGKST+MK+L GIY+ D G I  
Sbjct: 4   LLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIHF 63

Query: 83  KGAPIRLDSPLDALENGIAMIHQELNLMAYMTVAENIWIRREPKNRLGFIDHGEMYRRTE 142
            G  +    P  + E GI +IHQELNL+  +T+AENI++ RE  NRLG ID   MY   +
Sbjct: 64  LGKDVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRLGRIDWKRMYAEAD 123

Query: 143 TLLERLGIDLDPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRI 202
            LL+RL +  D    VGELS+  +QMVEIAK +S+ S V+IMDEPT ALT+ E   LF +
Sbjct: 124 KLLKRLNLRYDSRRLVGELSIGDQQMVEIAKVLSFESQVIIMDEPTDALTDTETASLFGV 183

Query: 203 IRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGREIT 262
           I++L+ +G GIVYI+H++ E+FEI D+ +VFRDG++IG     ++  D +I MMVGR++ 
Sbjct: 184 IKELQSQGCGIVYISHRLKEIFEICDDVTVFRDGQFIGERPVNELQEDSLIEMMVGRKLE 243

Query: 263 QMFPKEEVPIGDVVLSVKNLNLDGVFHDVSFDVRAGEILGVAGLVGSGRSNVAETVFGVT 322
           + +P+     G+V L V  L+  GV  +VSF +  GEILGVAGL+G+GR+ + + ++G  
Sbjct: 244 EQYPRLNQAPGEVRLQVSELSGPGV-ENVSFTLCKGEILGVAGLMGAGRTELMKVLYGAL 302

Query: 323 PASSGTISIDGKPVSIDSPTTAISHRMAFLTEDRKDTGCLLILNILENMQIAVLQDKYVA 382
           P + G + +DGK V   SP   ++  + +++EDRK  G +L +++ ENM +  L+    A
Sbjct: 303 PRTHGKVHLDGKDVVTRSPQDGLASGIVYISEDRKHDGLVLGMSVKENMSLTALRYFSNA 362

Query: 383 NGFVQENALSEACEEMCRKLRVKTPHLYERIENLSGGNQQKVLIGRWMLTKPRILILDEP 442
            G ++     +A  +  R   ++TP + + I  LSGGNQQKV I R ++T+PR+LILDEP
Sbjct: 363 AGSLRHGDEQQAVSDFIRMFNIRTPSMSQPIGLLSGGNQQKVAIARGLMTRPRVLILDEP 422

Query: 443 TRGIDVGAKAEIHKLVCEMARQGVAVIMISSEMPEVLGMSDRVMVMHEGRVTGFLARSEA 502
           TRG+DVGAK EI++L+ +  ++G+++I++SSEMPEVLGMSDR++VMHEGR++G     +A
Sbjct: 423 TRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQA 482

Query: 503 TQVKVMDLA 511
           TQ  +M  A
Sbjct: 483 TQETLMAAA 491



 Score = 97.8 bits (242), Expect = 8e-25
 Identities = 63/233 (27%), Positives = 118/233 (50%), Gaps = 9/233 (3%)

Query: 34  PGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRLKGAPIRLDSPL 93
           PGV   ++V F L +G +  + G  GAG++ LMK+L G     +G++ L G  +   SP 
Sbjct: 266 PGV---ENVSFTLCKGEILGVAGLMGAGRTELMKVLYGALPRTHGKVHLDGKDVVTRSPQ 322

Query: 94  DALENGIAMIHQELN---LMAYMTVAENIWIR--REPKNRLGFIDHGEMYRRTETLLERL 148
           D L +GI  I ++     L+  M+V EN+ +   R   N  G + HG+  +     +   
Sbjct: 323 DGLASGIVYISEDRKHDGLVLGMSVKENMSLTALRYFSNAAGSLRHGDEQQAVSDFIRMF 382

Query: 149 GIDLDPETR-VGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRIIRDLR 207
            I     ++ +G LS  ++Q V IA+ +     VLI+DEPT  +     + ++++I   +
Sbjct: 383 NIRTPSMSQPIGLLSGGNQQKVAIARGLMTRPRVLILDEPTRGVDVGAKKEIYQLINQFK 442

Query: 208 ERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGRE 260
           + G+ I+ ++ +M E+  ++D   V  +G+  G       T++ ++   VG++
Sbjct: 443 QEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQATQETLMAAAVGKQ 495