Pairwise Alignments

Query, 342 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 342 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  239 bits (610), Expect = 7e-68
 Identities = 136/326 (41%), Positives = 202/326 (61%), Gaps = 10/326 (3%)

Query: 21  RIPPEANIFFVLIGIALVYEILGWIFIGQ--SFLLNQQRLTIMILQVSVIGIIAVGVTQV 78
           RI P A  FF   G+ L++ IL  IF     S   +++ +  ++ +VS+ GI+AVG+T V
Sbjct: 17  RIDPIA--FFERFGV-LIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFV 73

Query: 79  IITGGIDLSSGSVVGLTAMLAASVGQSSTWPRALYPGLTDLPFFIPLAVGILAGALAGFI 138
           I+T GIDLS GS++ + AM AA V +   +          + + I L + +  G   GF+
Sbjct: 74  ILTAGIDLSVGSILAVCAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICLAMGTAIGFL 133

Query: 139 NGQLIARTKIPPFIATLGMMVTARGLSKWYTKGQPISGLTDGFTFIGTGVW-----PVVV 193
           +G  + R ++PPFI TLG M   RGL+     G PI+G   G+ + G G       P+ +
Sbjct: 134 HGLGVTRLRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDPGYRWWGRGELLGISIPIWI 193

Query: 194 FLVVAIIFHVALRYTRYGKFTYAIGANQQAARVSGINIEAHLIKVYAIAGLLAGLAGVVT 253
           F +VA+  ++AL  TR+G+F YAIG N +AAR++G+N++  L+ VY + G LAGLAG + 
Sbjct: 194 FAIVAVGGYLALHKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFIL 253

Query: 254 AARAQTAQAGMGVMYELDAIAAAVIGGTSLAGGAGRITGTVIGTIILGVMTSGFTFLRVD 313
           +AR  +A+A  G+ +EL  IA+ VIGGTSL GG GRI GT+IG+II+G++ +G   + V 
Sbjct: 254 SARLGSAEAVAGISFELRVIASVVIGGTSLMGGYGRIGGTIIGSIIMGILINGLVLMNVS 313

Query: 314 AYYQEIVKGLIIVAAVVADVYRQKKR 339
           AYYQ+I+ GLIIV AV  D Y + +R
Sbjct: 314 AYYQQIITGLIIVLAVAFDTYAKSRR 339