Pairwise Alignments

Query, 365 a.a., periplasmic mannitol-binding protein from Agrobacterium fabrum C58

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 15/222 (6%)

Query: 1   MDRRSFMKKGALAGAAATA-LAAPAIAQQ----NTKINWRLTSSFPKSLDTIYGGAEDIA 55
           M  +S +++  +A  AATA LAA  +A Q      K  ++  +  P++L     GA+  A
Sbjct: 1   MKTKSAIRRLLVATVAATAVLAASGVAAQVKERTLKFAFQNQTGHPQAL-----GAQKFA 55

Query: 56  KHVAAATDGNFTIQPFAAGEIVPGLQAADAVSSGTVEMCHTCSYYYVGKDPTFAIGTAIP 115
             VAA +DG   ++ FA G +   LQ   A+  GT+E+    +     +   FA     P
Sbjct: 56  DLVAAKSDGKMKVKLFAGGVLGGDLQTVSALQGGTIELTVLNAGILSAQVKEFA-AYDFP 114

Query: 116 FGLNARLTNSWFYEGN-GNKLLNEFYAKHNLYGMISGNTGAQMGGWFRKEINTVDDFKGV 174
           F  N         +G  G KL+ +   K  LYG+   + G +     R+ I   DD  G+
Sbjct: 115 FLFNDGKEADAVTDGPFGQKLMAKLEDK-GLYGLGYWDLGFRNLTNSRRPITRADDITGL 173

Query: 175 KMRI--AGLAGKVVEKLGVVPQQIAGGDIYPALEKGTIDAAE 214
           K+R+  + +   V   LG     +   ++YPALE+  +D  E
Sbjct: 174 KIRVIQSPIYIDVFSALGANATPLPFPELYPALEQKAVDGQE 215