Pairwise Alignments

Query, 489 a.a., TRAP dicarboxylate transporter subunit DctM from Agrobacterium fabrum C58

Subject, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

 Score =  158 bits (400), Expect = 3e-43
 Identities = 113/441 (25%), Positives = 196/441 (44%), Gaps = 28/441 (6%)

Query: 10  LMFLGMIIFMLYGFPVAFSLATVGLVFGVIGIFTEHFSPAFLQALPLRIFGIISNDL--- 66
           ++F    + +L G PVAF L    L            +  +L   P+ +F  +++ +   
Sbjct: 5   ILFGVFSLLLLVGTPVAFCLGLASLA-----------TVLYLDLPPVVVFQQLNSGMNAF 53

Query: 67  -LLAIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIIVGAILGAITGTVAAS 125
            +LAIPFF F G ++ R G+A+ L+     L G + GGL    ++   + G I+G+  A 
Sbjct: 54  SMLAIPFFIFAGDLMMRGGIADRLIGMAASLVGHLRGGLGQVNVVASTLFGGISGSAVAD 113

Query: 126 VITMGVISLPIMLKYGYNPRLATGVIAASGTITQVIPPSLVLIVLADQLGK--SVGDMYL 183
              +G I +P M ++GY    A  V   S  I  +IPPS  +I+ +   G   S+ D++ 
Sbjct: 114 ASAIGGIMIPQMARHGYAKDYAVNVTVNSAIIALMIPPSHNMIIYSLSAGGTISIADLFT 173

Query: 184 GAIGPSILQVTIFMLFILLMSIVRPKDLPALPPEARGELNRALVFRVLAGMIPSIVLIFL 243
             I P +L     M+   +++  R       P           V R +   IP I+LI +
Sbjct: 174 AGIMPGLLLAAAMMITAYVVARNRGYPAGTFP-------GWHAVLRSVVAAIPGIMLIGI 226

Query: 244 VLGTIFLGLATPTEAGALGVVGA-MVLAAAHRRLSWDLVKQGMHSTMHITSMVVFILVGA 302
           + G +  G+ T TE+  + V+ A +V    +R + W    +     +  T+MV+ ++  A
Sbjct: 227 IFGGVRSGIFTATESSCIAVIYALLVTTLVYREMHWADFVEATLGAVRTTAMVLLVIGTA 286

Query: 303 TCFSLVFQGMDGSLWIEHMLSGIPGGPIGFLIFVNIFIFFLAFFLDFFEIAFIVIPMLAP 362
             F  +   +        M+  I   P   L+ +NI +  L  F+D   +  I  P+  P
Sbjct: 287 ASFGWLMAFLQVPKATIEMMQAISSNPYVILLLINIILLILGTFMDMAPMIIICTPIFLP 346

Query: 363 IAQSLGIDLIWFGVLICINMQTSFMHPPFGFALFYLRSIAPRSVKTSDIYMGAIPWLGMQ 422
           + ++ GID + FGV++ +N       PP G  LF     A   +   +      P+ G  
Sbjct: 347 LVKAFGIDPVHFGVILILNAGIGLNTPPVGSVLFV--GCAVGKITIGEAMKTIWPFFGAS 404

Query: 423 LILVAIVIFWPESVTYWLDKA 443
           + ++ IV + P +V+ WL  A
Sbjct: 405 IAVLMIVTYVP-AVSLWLPAA 424