Pairwise Alignments

Query, 489 a.a., TRAP dicarboxylate transporter subunit DctM from Agrobacterium fabrum C58

Subject, 650 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  273 bits (697), Expect = 2e-77
 Identities = 167/376 (44%), Positives = 234/376 (62%), Gaps = 15/376 (3%)

Query: 7   LPPLMFLGMIIFMLYGFPVAFSLATVGLVFGVIGIFTEHFSPAFLQALPLRIFGIISNDL 66
           + P+MF  +++F+L G+PVAFSLA  GL+FG+IGI+   F P FLQALP R++G ++N++
Sbjct: 47  MAPIMFGALVLFLLLGYPVAFSLAANGLIFGLIGIYLGLFEPKFLQALPERVYGTMNNEV 106

Query: 67  LLAIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIIVGAILGAITGTVAASV 126
           LLA+PFFTFMG ILER G+AEDLL+  G++FG+I GGLAYAVI VGA+L A TG VAASV
Sbjct: 107 LLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASV 166

Query: 127 ITMGVISLPIMLKYGYNPRLATGVIAASGTITQVIPPSLVLIVLADQLGKSVGDMYLGAI 186
           I+MG+ISLPIML+YGY+ R+A+GVIAASGT+ Q+IPPSLVLIV+ADQL +SVGDMY GA 
Sbjct: 167 ISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAF 226

Query: 187 GPSILQVTIFMLFILLMSIVRPKDLPALPPEA---RGELNRALVFRVLAGMIPSIVLIFL 243
            P +L  +++ ++I ++S + P   P LP EA   R    + L  R++ G + +    FL
Sbjct: 227 VPGLLLASLYAVYIFIISSIFPNAAPGLPLEAQTLRDPEQKTLPSRIM-GAVAAAGFAFL 285

Query: 244 VLGTIFLGLATPTEAGALGVVGAMVLAAAHRRLSWDLVKQGMHSTMHITSMVVFILVGAT 303
           +      GL     AGAL  V  M +      +    +  G    +  +  +   L  A 
Sbjct: 286 IARGSLPGLT----AGALPGVANMAVWGIGSFVVLFFIMSGTAKLLTPSLFIALALSIAG 341

Query: 304 CFSLVFQG--MDGSLWIEHMLSGIPGGPIGFLIFVNIFIFFLAFFLDFFE-IAFIVIPML 360
              L+       G+ ++   +S   G  I F++ V   +F L       E + F+++P L
Sbjct: 342 AIELMEMSHVKFGADYVVLTMSATVG--IAFVVAVINRVFRLKLLSKLAEQVVFVMVPPL 399

Query: 361 APIAQSLGIDLIWFGV 376
           A I   LG   I+ GV
Sbjct: 400 ALIFLVLG--TIFIGV 413



 Score =  254 bits (649), Expect = 6e-72
 Identities = 125/247 (50%), Positives = 174/247 (70%), Gaps = 13/247 (5%)

Query: 219 RGELNRALVFRVLAGMIPSIVLIFLVLGTIFLGLATPTEAGALGVVGAMVLAAAHRRLSW 278
           R +L   L  +V+  M+P + LIFLVLGTIF+G+ATPTE GA+G +GA++LA A  RL +
Sbjct: 380 RLKLLSKLAEQVVFVMVPPLALIFLVLGTIFIGVATPTEGGAMGSLGAVILAFARGRLKF 439

Query: 279 DLVKQGMHSTMHITSMVVFILVGATCFSLVFQGMDGSLWIEHMLSGIPGGPIGFLIFVNI 338
           DL++Q  +ST  +++ V+FIL+GA  FSL F G+DG  W+E +L  +PGG  GFLI VN 
Sbjct: 440 DLLRQATYSTAKLSAFVLFILLGARVFSLTFYGVDGHKWVEELLVSLPGGQTGFLIAVNA 499

Query: 339 FIFFLAFFLDFFEIAFIVIPMLAPIAQSLGIDLIWFGVLICINMQTSFMHPPFGFALFYL 398
            +F LAFFLD+FE+AFI+IP+L P A  +GIDLIWFGV++ +NMQTSFMHPPFGFALF+L
Sbjct: 500 LVFVLAFFLDYFELAFIIIPLLGPAADKMGIDLIWFGVMLAVNMQTSFMHPPFGFALFFL 559

Query: 399 RSIAPR-------------SVKTSDIYMGAIPWLGMQLILVAIVIFWPESVTYWLDKAPD 445
           RS+A +              V T  IY GA+P++ +QL++VA++I +P  VT++      
Sbjct: 560 RSVAAKVPYVDRVTGKMMQPVTTGQIYWGAVPFVCIQLVMVALIILFPGMVTHYKSGGIQ 619

Query: 446 VDLNSIK 452
           +D   I+
Sbjct: 620 LDQQQIQ 626