Pairwise Alignments

Query, 489 a.a., TRAP dicarboxylate transporter subunit DctM from Agrobacterium fabrum C58

Subject, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

 Score =  187 bits (476), Expect = 5e-52
 Identities = 129/438 (29%), Positives = 221/438 (50%), Gaps = 27/438 (6%)

Query: 11  MFLGMIIFMLYGFPVAFSLATVGLVFGVIGIFTEHFSPAFLQALPLRIFGIISNDLLLAI 70
           +FL + +FM  G P+A SL   G V  ++      FS   + +L +++F        LAI
Sbjct: 6   LFLLLFVFMFLGVPIAISLGLSGAVSILM------FSQDSVSSLAIKLFETSDAYTFLAI 59

Query: 71  PFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIIVGAILGAITGTVAASVITMG 130
           PFF   GA +   G+A+ L++      G I GGLA A ++   +  A++G+  A+V  +G
Sbjct: 60  PFFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVG 119

Query: 131 VISLPIMLKYGYNPRLATGVIAASGTITQVIPPSLVLIVLADQLGKSVGDMYLGAIGPSI 190
            I++  M++ GY      G+I  +GT+  +IPPS+V++V +     SVG +++  + P +
Sbjct: 120 SIAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGL 179

Query: 191 LQVTIFMLFILLMSIVRPKDLPALPPEARGELNRALVFRVLAGMIPSIVLIFLVLGTIFL 250
           L     ML I +  + R K LPA P     E   +   R   G++    L+ ++LG I+ 
Sbjct: 180 L--LGLMLMIAIYIVARIKKLPAQPRATFREWLTS-ARRAFWGLL----LLVIILGGIYS 232

Query: 251 GLATPTEAGALGVV-GAMVLAAAHRRLSWDLVKQGMHSTMHITSMVVFILVGATCFSLVF 309
           G+ TPTEA A+  V  A V    ++ +      + +  +  +  M++FI+  A  F+ V 
Sbjct: 233 GMFTPTEAAAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVL 292

Query: 310 Q----GMDGSLWIEHMLSGIPGGPIGFLIFVNIFIFFLAFFLDFFEIAFIVIPMLAPIAQ 365
                  + + W+  +  G+   PIGFLI VN+ +     F++   I  I+ P+  PIA 
Sbjct: 293 TTEQIPQEITAWV--LSEGLT--PIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAM 348

Query: 366 SLGIDLIWFGVLICINMQTSFMHPPFGFALFYLRSIAPRSVKTSDIYMGAIPWLGMQLIL 425
            LGID I  G+++ +NM+   +HPP G  LF   ++    +        A+PWL + L+ 
Sbjct: 349 KLGIDPIHLGIVMVVNMEIGLVHPPVGLNLFVTSAVT--GLTLGQTIRAALPWLMILLVF 406

Query: 426 VAIVIFWP---ESVTYWL 440
           + +V + P    ++ +WL
Sbjct: 407 LIMVTYLPFISLALPHWL 424