Pairwise Alignments

Query, 578 a.a., sensory methylation accepting chemotaxis protein from Agrobacterium fabrum C58

Subject, 567 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  206 bits (525), Expect = 2e-57
 Identities = 114/264 (43%), Positives = 174/264 (65%), Gaps = 4/264 (1%)

Query: 288 SIAEFQKTLENVLGQTGD----LTRSSQEVSEASVNLAERSREQAVALEETSAALEEITA 343
           SI   Q  L +++G+  D    +  +S +++  + +L+ R+ +QA +LE+T+A++EE+T+
Sbjct: 261 SIKLMQLQLTSIVGKIKDSSDVIADASGQIASGNQDLSSRTEQQASSLEQTAASMEELTS 320

Query: 344 TVRSSTENMKETRKLVQSARASTVASTEVVERTVDAMQRIETASREISQIIGVIDEIAFQ 403
           TV+ + +N ++  +L  SA    V    VV + V  M  I  +S++I  IIGVID IAFQ
Sbjct: 321 TVKQNADNARQANQLAVSASEVAVKGGSVVSQVVTTMGSINASSKKIVDIIGVIDGIAFQ 380

Query: 404 TNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSASAAKEIKALINNSGTEVLEGVRL 463
           TN+LALNA VEAARAG+ G+GFAVVA EVR LAQRSA+AAKEIK LI +S  +V EG + 
Sbjct: 381 TNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVAEGSKQ 440

Query: 464 VGETGEALKQIDSLVRHIDGNVDTISKAADEQAAGISEINKAVNRLDRMTQENAAMSART 523
           V E G  + +I   VR +   +  I+ A+ EQ +GI +IN+A+ ++D++TQ+NAA+    
Sbjct: 441 VEEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEA 500

Query: 524 TVISTTLAQGADALAQLVSLFKLN 547
           +  + +L + A +L Q VS FKL+
Sbjct: 501 SAAAQSLQEQAGSLVQAVSTFKLD 524



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 15/121 (12%)

Query: 272 KPFVGEFERLRQDFNKSIAEFQKTLENVLGQT-------GDLTRSSQE-------VSEAS 317
           K  +G+      + +K + E  +T++ ++G         G++T +SQE       +++A 
Sbjct: 424 KTLIGDSVEKVAEGSKQVEEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAI 483

Query: 318 VNLAERSREQAVALEETSAALEEITATVRSSTENMKETRKLVQSARASTVASTEVVERTV 377
             + + +++ A  +EE SAA + +     S  + +  T KL  S +A+  A  E +    
Sbjct: 484 TQMDQVTQQNAALVEEASAAAQSLQEQAGSLVQAV-STFKLDASHQAAPRARAEALPAVQ 542

Query: 378 D 378
           D
Sbjct: 543 D 543



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 6/144 (4%)

Query: 277 EFERLRQDFNKSIAEFQKTLENVLGQTGDLTRSSQEVSEASVNLAERSREQAVALEETSA 336
           E + L  D  + +AE  K +E       ++  S + V++    +   S+EQ   +E+ + 
Sbjct: 422 EIKTLIGDSVEKVAEGSKQVEEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQ 481

Query: 337 ALEEITATVRSSTENMKETRKLVQSARASTVASTEVVER-TVDAMQRIETASREISQIIG 395
           A+ ++    + +   ++E     QS +    +  + V    +DA    + A R  ++ + 
Sbjct: 482 AITQMDQVTQQNAALVEEASAAAQSLQEQAGSLVQAVSTFKLDASH--QAAPRARAEALP 539

Query: 396 VIDEIAFQTNLLALNAGVEAARAG 419
            + +     N  +L A  + A AG
Sbjct: 540 AVQD---DNNKSSLPAAPQLAVAG 560