Pairwise Alignments

Query, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 428 a.a., mannose/glucose ABC transporter, glucose-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 2e-62
 Identities = 133/347 (38%), Positives = 180/347 (51%), Gaps = 10/347 (2%)

Query: 6   ISAAFLASVMIPAGMAGAT---DLEVTHWWTSGGEAAAVAELAKAFDATGNKWVDGAIAG 62
           ++AA   + +IP G   A     +EV HWWTSGGE AAV  L    +  G  W DGA+AG
Sbjct: 7   LAAAISFASLIPLGAQAADAKGSVEVVHWWTSGGEKAAVDVLKAQVEKDGFIWKDGAVAG 66

Query: 63  SGG-TARPIMISRITGGDPMGATQFNHGRQAEELVQAGLMRD--LSDVAAKGNWKEVIKP 119
            GG TA  ++ SR   G+P G  Q   G   ++    GL+    L DVA +G W  ++  
Sbjct: 67  GGGATAMTVLKSRAVAGNPPGVAQIK-GPDIQDWAATGLLDADVLKDVAKEGKWDSLLDK 125

Query: 120 ASLLDSCTIDGKIYCAPVNIHSWQWLWLSNAAFKKAGVE-VPKNWTEFVAAAPALKKAGI 178
             + D+   DG     PVNIH   WLW++   FKKAG++  P    EF AAA  LK AG 
Sbjct: 126 -KVADTVKYDGDYVAVPVNIHRINWLWINPEVFKKAGIDKAPTTLDEFYAAADKLKAAGF 184

Query: 179 QPLALGGQAWQANGLFDTLTLSIGGKDLYQKVYGDKDAEAAAGPDMAKIFAAAVE-ARDM 237
            PLA GGQ WQ + +F+++ LS+ G D Y+K   D D+    GP M K      + A  M
Sbjct: 185 IPLAHGGQPWQDSTVFESVVLSVMGVDGYKKALVDLDSATLTGPQMVKALTELKKVATYM 244

Query: 238 AKGTNVQDWNQATNMVITGKAGGQIMGDWAQGEFQLANQKAGTDYSCLPGLGLNDYITTG 297
                 QDWN     VI GKAG QIMGDWA+ E+ LA + AG DY C+P  G +      
Sbjct: 245 DPDGKGQDWNLEAAKVINGKAGMQIMGDWAKSEWTLAKKTAGKDYQCVPFPGTDKSFLYN 304

Query: 298 GDAFYFPVLKDEAKTKAQDVLAETIVDPKTQVAFNLKKGSLPIRGDV 344
            D+       +   +  Q  +A  ++    Q  F++ KGS+P+R D+
Sbjct: 305 IDSLVVFKQNNAGTSAGQQDIARKVLGEDFQKVFSINKGSIPVRNDM 351