Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 278 a.a., carbohydrate ABC transporter permease from Rhizobium sp. OAE497

 Score =  124 bits (311), Expect = 3e-33
 Identities = 85/279 (30%), Positives = 146/279 (52%), Gaps = 13/279 (4%)

Query: 36  RNIILYGTLFVAAAYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEITFEPWVKAWANACT 95
           R I L+  L   A  +L PL++M + S   MP+     IF+P  EI   P     AN   
Sbjct: 11  RKIALHAVLTPLAIIWLFPLWMMFIFST--MPDY---GIFSP--EIVLLPSTNFVANFRD 63

Query: 96  GLNCDGLSRGFWNSVRILVPSVVISIVVASVSGYAMANWKFKGSELFFSILIIGAFIPYQ 155
                G +R  + S+ + V   V+S+++ S++G+A+A ++F G  +  +I++    +P+ 
Sbjct: 64  LEAQTGFTRAMFTSISVAVIYTVLSVLLTSMAGWALARYRFAGRSVVVAIILGTITLPFA 123

Query: 156 VMIYP-IVIVLREMGIYGTLTGLVIVHTIFGMPILTLLFRNYFASLPEELFKAARIDGAN 214
           V++ P  ++V RE  +  T   L++      + +L +  R  F+ +P ELF AAR++G  
Sbjct: 124 VVVIPQFIMVAREFKLANTWVALIVPPLFNSLGVLFM--RQSFSMMPNELFDAARVEGVK 181

Query: 215 FWQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVF-TRPEYYPMTVQLNNIVNSVQG 273
            WQI+ RI LP++ P      I+     WN++L+ ++  +RP      V L  ++   + 
Sbjct: 182 EWQIFLRIALPLARPTMAALAIILFLVSWNNYLWPLLINSRPAMMTAPVALGTLIGLTK- 240

Query: 274 VKEYNVNMAATLLTGAVPLIVYFVSGRLFVRGIAAGAVK 312
           V    +   AT+LT  + LIV+ +  R F+ GIAAGA+K
Sbjct: 241 VSWGGIMAGATMLTAPI-LIVFVLLQRHFIAGIAAGAIK 278