Pairwise Alignments

Query, 362 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 371 a.a., ABC transporter nucleotide binding/ATPase (sugar) from Agrobacterium fabrum C58

 Score =  300 bits (768), Expect = 4e-86
 Identities = 157/290 (54%), Positives = 208/290 (71%), Gaps = 7/290 (2%)

Query: 5   VSIRDLSLSFGAVTVLKDLNLDIYDGEFLVLLGSSGCGKSTLLNCIAGLLEPTDGQIFIK 64
           V ++ +S SFGAV V+ D++L I  GEF+V +G SGCGKSTLL  IAGL E + G+I I 
Sbjct: 4   VELKGVSKSFGAVDVIHDIDLSITAGEFVVFVGPSGCGKSTLLRLIAGLEETSRGEILIG 63

Query: 65  DRNVTWEEPKDRGIGMVFQSYALYPQMTVEKNLSFGLQVAKIPKDEIERRVKRAAGILQI 124
            R+VT  +P DRGI MVFQSYALYP MTV +N+ FGL++A  PK+E+   V+ AA IL +
Sbjct: 64  GRDVTDADPSDRGIAMVFQSYALYPHMTVAQNMGFGLRMAHRPKEEVTAMVRHAAEILHL 123

Query: 125 EPLLKRKPAELSGGQRQRVAIGRALVRDVDVFLFDEPLSNLDAKLRSELRVEIKRLHQSL 184
            PLL R+P +LSGGQRQRVAIGRA+VR+ +VFLFDEPLSNLDA+LR  +R+EI RLH+ L
Sbjct: 124 TPLLDRRPGQLSGGQRQRVAIGRAIVRNPEVFLFDEPLSNLDAELRVGMRIEIARLHKQL 183

Query: 185 KNTMIYVTHDQIEALTLADRIAIMKSGVIQQLADPVTIYNKPRNLFVAGFIGSPSMNFLR 244
            NTMIYVTHDQ EA+TLAD+I ++++G I+Q+  P  +Y+ P NLFVAGFIGSP MNF+ 
Sbjct: 184 GNTMIYVTHDQTEAMTLADKIVVLRAGRIEQIGSPFELYSDPDNLFVAGFIGSPKMNFVP 243

Query: 245 GELIEKDGKVVFTTNGVSFSLDGYQPETPLAAGRAVVLGVRPEHVRVDAD 294
                + G +V   + ++F+     P         + LG+RPE++ +  D
Sbjct: 244 AG--HEAGALVVAGHRLTFAAPAGLP-----TNCQLQLGIRPENLTLTRD 286