Pairwise Alignments

Query, 324 a.a., trehalose/maltose ABC transporter permease from Agrobacterium fabrum C58

Subject, 313 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score =  155 bits (393), Expect = 9e-43
 Identities = 101/320 (31%), Positives = 162/320 (50%), Gaps = 20/320 (6%)

Query: 1   MNDIALQRPVAAASTGSDLQSERLKSAWLFLAPTFLVLALVAGWPLVRTVWFSFTDASLT 60
           M ++A   P    S  + +   R      F+ P  + L     +PL   VW  FTD  + 
Sbjct: 1   MANVAAAEPTHKRSFWAGIGQGRHVLGIAFMVPAAVFLLFFLTYPLGLGVWLGFTDTRIG 60

Query: 61  NLDGAQFVGLKNYLTWITLSSGRTIYRGLLADPAWWGAVLNTLKFTILSVSFETVLGLIV 120
             +G  F+GL+NY             + L  D  +W  V NTL +TI +   +  LGL +
Sbjct: 61  R-EGV-FIGLENY-------------QSLWGDSLFWLVVFNTLLYTIAASILKFALGLWL 105

Query: 121 ALVLNAEFKGRGFVRAAILVPWAIPTIVSAQMWAWMLNDQFGILNDLFLNLGLISNKIAW 180
           AL+LN     + F RA +L+PW +PT++SA  + W+ + Q+ I++   + +GLIS  I +
Sbjct: 106 ALLLNENLPFKAFFRAVVLLPWVVPTVLSAIAFWWIFDSQYSIISWALIKMGLISAPINF 165

Query: 181 TANPDTAMVAVLIVDIWKTTPFMALLILAGLQMVPKDMYEAAKVDGIHPVKVFFRVTLPM 240
             +   A  +V+  ++W+  PF+A+ +LAGLQ +   ++EAA +DG    + F  +TLPM
Sbjct: 166 LGDVTNARASVIAANVWRGIPFVAISLLAGLQTISPSLHEAATLDGATNWQRFRYITLPM 225

Query: 241 IRPALMVAVIFRMLDAMRVFDLIYILT---PNNAQTRTMSVLARENLFDFDKFAYGAA-A 296
           + P + V + F +L     F LIY+LT   P N+ T  M+ L+ +          GAA A
Sbjct: 226 LSPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNS-THLMATLSFQRAIPGGSLGEGAAIA 284

Query: 297 STMLFLIIASITVIYMWLGR 316
             M+  ++A+I   Y  L R
Sbjct: 285 VAMIPFLLAAILFSYFGLQR 304