Pairwise Alignments

Query, 452 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 447 a.a., Type I secretion system membrane fusion protein PrsE from Xanthobacter sp. DMC5

 Score =  197 bits (501), Expect = 6e-55
 Identities = 127/431 (29%), Positives = 208/431 (48%), Gaps = 4/431 (0%)

Query: 24  PRSIRLHSSIGLAVLLASFGGFGYWAGTAPLSSAIIAQGSFVATGNNKVVQHLEGGIIKE 83
           P   R  + +G A++  +F GFG WA  A +  A++A G        +VVQHLEGGI+  
Sbjct: 19  PSGYRSVALLGYALIAVTFLGFGGWAAMARVDGAVVAPGVIGVESKRQVVQHLEGGIVAA 78

Query: 84  MMVSEGDTVKVGDVLLTLDKTTALANERMFQLRRLRLETIVTRLRAEAQGEKSFKVPDIV 143
           ++V EG TV+  + L  LD T + AN+     +R    T+  RL AE     +   P  +
Sbjct: 79  ILVQEGQTVRRDETLFRLDPTQSRANDEAALAQRRAALTLEARLVAERDDAPAITFPPEL 138

Query: 144 MKEASDPDIKSIIQSQNVVFHSKLVKLDEQLNLINKNIKSLEFRFAGYDGQKQSFDRQLA 203
           ++ A  P ++  +  Q   F  +      Q++++N  I  L     G   ++ S  +QLA
Sbjct: 139 LELARVPAVREAMADQIAQFRDRRAAFQSQIDILNGRIVQLGHELEGLAQERASARQQLA 198

Query: 204 LLTQERDSKERLAKDGVIRKTDMLALERAIADAMGDIARLTGEMNQSEAEIAKFKQEAVI 263
            +  E  +   L +  ++ K+ + +LER  A   G + R   +  ++   I + K + V 
Sbjct: 199 FVEDELTAVRELERKHLVNKSRVSSLEREKARLDGLVGRNIADEAKARGSIGEQKMQIVQ 258

Query: 264 AVNANKQAALDALEIAESDLDSVREQVRGAAEVLERTVIRSPVNGTV--IRAYYHTPGGV 321
                 +     L      L  ++E+V+    VLER  IR+P  G V  I    +T G V
Sbjct: 259 LTQQRAEDVGSQLLDIREKLAELKEKVQVTRSVLERIEIRAPSGGIVQNINPRIYTVGAV 318

Query: 322 ITTGKPIMEILPAHVPLILEAQVLRTSIDQLHEGQTAAIRLSALNRRTTPVLNGKVFYVS 381
           +  G  ++EI+P   PL++EA+V    ID+L   +   +R  A + RTTP++ G +  VS
Sbjct: 319 VRPGDTLLEIVPVDAPLVVEARVPVQDIDRLDLHEAVEVRFPAFHGRTTPMVLGHLASVS 378

Query: 382 ADSIEENAGLQVKDVYIVRVQISDEEIAKVHNFHPVPGMPADVLIQTSERTFFEYLTKPI 441
            D + +    Q    ++ RV + + ++         PGM A+V   T  RT   YL +P+
Sbjct: 379 RDRLVDETTHQ--PYFLARVGVDETDVPADLRSRLQPGMDAEVAFHTGSRTVMSYLLRPL 436

Query: 442 ADSMSRAFKER 452
           AD+M+RAF ER
Sbjct: 437 ADAMARAFTER 447