Pairwise Alignments

Query, 452 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 7e-36
 Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 62/422 (14%)

Query: 36  AVLLASFGGFGYWAGTAPLSSAIIAQGSFVATGNNKVVQHLEGGIIKEMMVSEGDTVKVG 95
           A++LA+F  +  W     +S+     G  + +   +V+Q  EGGI+ +M V+EGD V+ G
Sbjct: 30  ALMLAAFLAWAAWFEVTEVSTGT---GKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERG 86

Query: 96  DVLLTLDKTTALANERMFQLRRLRLETIVTRLRAEAQGEKSFKVPDIVMKEASDPDIKSI 155
            VL  LD T   ++    + +         RL+AE  G K    P+ +      PD+   
Sbjct: 87  QVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTG-KPLTFPESLR---DSPDL--- 139

Query: 156 IQSQNVVFHSKLVKLDEQLNLINKNIKSLEFRFAGYDGQKQSFDRQLALLTQERDSKERL 215
                         +D +  L     + LE   AG     Q       L+  E    E L
Sbjct: 140 --------------IDAETALYQTRRRGLEQTLAGIQDSLQ-------LVRSELKITENL 178

Query: 216 AKDGVIRKTDMLALERAIADAMGDIARLTGEMNQSEAEIAKFKQEAVIAVNANKQAALDA 275
           AK G   + +++ L R                 +SE E+   +  +   V A ++ A   
Sbjct: 179 AKMGASSRVEVIRLNR----------------QRSELELKANEARSDYLVRAREELAK-- 220

Query: 276 LEIAESDLDSVREQVRGAAEVLERTVIRSPVNGTVIRAYYHTPGGVITTGKPIMEILPAH 335
              A ++ D++ E +RG ++ L R  +RSPV G V     +T GGV+  G  +M+I+P  
Sbjct: 221 ---ASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMD 277

Query: 336 VPLILEAQVLRTSIDQLHEGQTAAIRLSALNRRTTPVLNGKVFYVSADSIEENAGLQVK- 394
             L++E ++    I  +H  Q A +++SA +      L+GKV  +S D++++    +VK 
Sbjct: 278 ERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQD----EVKP 333

Query: 395 DVYIVRVQISDEEIAKVH----NFHPVPGMPADVLIQTSERTFFEYLTKPIADSMSRAFK 450
           ++Y  RV I  E+ +  +     F  VPGM A V I+T E+T  +YL KP+ +    A +
Sbjct: 334 EIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL-NRAKEALR 392

Query: 451 ER 452
           ER
Sbjct: 393 ER 394