Pairwise Alignments

Query, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 289 a.a., sugar ABC transporter permease from Dickeya dadantii 3937

 Score =  181 bits (459), Expect = 2e-50
 Identities = 104/286 (36%), Positives = 161/286 (56%), Gaps = 14/286 (4%)

Query: 16  RWTRWLDLGDRLLAVLLLAPAAILLSLIIVYPVARLVYTSFFSLSLTSGLPAEFIGFENY 75
           RW RWL          LL PAA LL L+ +YP+ +++  SF  +   +     ++G ENY
Sbjct: 6   RWQRWL----------LLMPAATLLLLLTLYPIGQMLLYSFSKVDYAAS--RSWVGLENY 53

Query: 76  TAMFDDPIFWETTWNTVLITLITVPGALFMGLGLALLANLPF-SMQWPMRLSLLIPWALP 134
             +F D  F  +  NT+L +  +    + +GL LALL    F   QW + L L+ P  + 
Sbjct: 54  RQLFADWFFTTSLKNTLLFSFGSSLLQVLLGLALALLLYRHFPGRQWVLSL-LIYPMMIS 112

Query: 135 LSFAGLIFAWFFHYEYGVVNDVLNRLGFEGIIWFNSPNWAFAAICLTIIWKTSSFMALMI 194
                 I+  +FHY++G++N+ L  LG     W +SP+ A  ++ L  IW+ +    L+I
Sbjct: 113 TLVCSAIWRVWFHYDFGLLNNCLTALGLMPQPWLSSPHLALWSLMLVDIWQWTPMACLVI 172

Query: 195 LAGLQTIPRSLYEAADVDGAGKIRRFFEITLPLLKPSIVVALIFRTITALQTFDIPYMMT 254
           LAGLQ IP+ + EAA  DGA   +R + +TLPL++  +++AL+ R+I   + FD  Y +T
Sbjct: 173 LAGLQAIPKDVLEAAQSDGANGWKRLWYVTLPLIRQPLMLALLLRSIDTFKLFDKVYALT 232

Query: 255 GGGPGTSTTTLAMYIHQNTVSFLDLGYGSALAVVMFALSMCVTAVY 300
           GGGPG +T TL++YI+Q    F +LG  SA AV+M   +  ++ VY
Sbjct: 233 GGGPGYATETLSLYIYQQGFKFFNLGLASAGAVIMLLFAAAMSLVY 278