Pairwise Alignments

Query, 291 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 302 a.a., putative D,D-dipeptide transport system permease protein DdpC from Azospirillum sp. SherDot2

 Score =  332 bits (852), Expect = 5e-96
 Identities = 161/285 (56%), Positives = 218/285 (76%)

Query: 5   TSTAPPTRNPTILFIRRLLKRRTVAAGLIVLLVFVLLAVFAPMIAPYSPSKLSIVNRLKP 64
           ++ A  +R+P  L +R+L +RR V    +V+   + +A+ AP I P++P+K+ I+ RLKP
Sbjct: 16  SAKAGNSRSPAALLLRQLFRRRLVVLSFLVMAAILAVALLAPWITPFNPAKMDILGRLKP 75

Query: 65  PSELYWFGTDEFGRDVFSRTIYAGRLSLLVGAAVVALSSIIGITLGLLAGFFQKLDTPIA 124
           P+  +WFGTDE+GRDV SR +   RLSLLVG  VV +++++G  LGL AG+ + LD  + 
Sbjct: 76  PTAAHWFGTDEYGRDVLSRVMLGARLSLLVGLLVVVVATVLGTLLGLAAGYIRPLDGLLM 135

Query: 125 RLIDAMMAFPDILLAIALVAALGPSLTTVIIALAVVYSPRLARIVRASTLVIRELPYVEA 184
           RL DA+MAFPDILLAIA +AALGPSL  V++AL +VY+PR+AR+VRA+ LV+RE+P++EA
Sbjct: 136 RLTDALMAFPDILLAIAFMAALGPSLYNVVLALGIVYTPRVARVVRAACLVVREMPFIEA 195

Query: 185 ARALGISTFHIMTRHVLRNLVSPILVQCTFLFASAMLAEAGLSFLGLGVSPEIPTWGTMI 244
           A ALG ST  I+  H+L NL+SPILVQ TF+FA A+L EA LSFLG+GV P  PTWG MI
Sbjct: 196 ATALGASTPRIVFLHILPNLMSPILVQATFIFAYAILTEAALSFLGVGVPPTTPTWGNMI 255

Query: 245 SAGRQYIGQADWMTYFPGFAIILSVLSLQMVGDGLRDMLDPRLRR 289
           ++ +QY  QADW+  FPG AI+L+VLSLQ+VGDGLRD LDPRL++
Sbjct: 256 ASAQQYFQQADWLILFPGCAIVLTVLSLQIVGDGLRDALDPRLQK 300